RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 KRT20P35900 424 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 SUCLG1P53597 346 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 PSMD4P55036 377 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 NR1H2P55055 460 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 SRYQ05066 204 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 ACSM2AQ08AH3 577 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 C17orf67Q0P5P2 114 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 LCP2Q13094 533 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 CAPRIN1Q14444 709 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 ETFDHQ16134 617 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 BEX5Q5H9J7 111 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 ACSM2BQ68CK6 577 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 FAM71E1Q6IPT2 247 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 C22orf34Q6ZV56 151 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 GGNQ86UU5 652 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 PRIMA1Q86XR5 153 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 P3H2Q8IVL5 708 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 SLC22A9Q8IVM8 553 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 FAM9CQ8IZT9 166 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 GTPBP8Q8N3Z3 284 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 ZNF611Q8N823 705 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 OR6K3Q8NGY3 331 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 UHMK1Q8TAS1 419 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 ACMSDQ8TDX5 336 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 C16orf78Q8WTQ4 265 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 FIG4Q92562 907 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 GMPPAQ96IJ6 420 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 ZNF845Q96IR2 970 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 USB1Q9BQ65 265 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 GRIP2Q9C0E4 1043 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 CDC42EP4Q9H3Q1 356 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 MYNNQ9NPC7 610 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 GIMAP4Q9NUV9 329 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 STOML1Q9UBI4 398 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 DKKL1Q9UK85 242 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 MRTO4Q9UKD2 239 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 HEATR5AQ86XA9 2040 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 DLX3O60479 287 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 THBDP07204 575 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 GSTA1P08263 222 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 POU2F1P14859 743 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 TAC1P20366 129 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 ATP5F1P24539 256 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 FRKP42685 505 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 RPS3AP61247 264 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 ZNF763Q0D2J5 394 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 DECR1Q16698 335 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 CTU2Q2VPK5 515 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 GLE1Q53GS7 698 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 SGO1Q5FBB7 561 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 LGSNQ5TDP6 509 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 GPRIN3Q6ZVF9 776 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 CHMP1BQ7LBR1 199 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 YTHDF3Q7Z739 585 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 SLC44A2Q8IWA5 706 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 CIARTQ8N365 385 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 MMGT1Q8N4V1 131 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 CDYL2Q8N8U2 506 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 OR4K17Q8NGC6 315 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 OR4N2Q8NGD1 307 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 FNDC9Q8TBE3 224 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 FAM110BQ8TC76 370 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 METTL6Q8TCB7 284 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 KAT2AQ92830 837 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 GFM2Q969S9 779 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 ELP4Q96EB1 424 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 CCL19Q99731 98 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 MED18Q9BUE0 208 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 RTN4RQ9BZR6 473 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 DSN1Q9H410 356 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 ZNF395Q9H8N7 513 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 Q9N2J8 555 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 PRM3Q9NNZ6 103 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 FANCFQ9NPI8 374 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 RRAGDQ9NQL2 400 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 PPP4R1LQ9P1A2 415 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 CCL27Q9Y4X3 112 aa10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 ANK3Q12955 4377 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-206ENST00000535668 ESYT3A0FGR9 886 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 TRIM49D1C9J1S8 452 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 H7C1Q1 480 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 OVOL3O00110 214 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 KIF2AO00139 706 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 NKX2-2O95096 273 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 HSPA4LO95757 839 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 CHN1P15882 459 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 GCAP28676 217 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 CASQ1P31415 396 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 ARL1P40616 181 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 ALDH9A1P49189 494 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 CLK3P49761 638 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 CLDN20P56880 219 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 RAC1P63000 192 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 CKAP4Q07065 602 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 KIAA0040Q15053 153 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 POU4F3Q15319 338 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 UBAP2Q5T6F2 1119 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 C8orf74Q6P047 294 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 ZCCHC12Q6PEW1 402 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 STAC2Q6ZMT1 411 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms