RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 UPRTQ96BW1 309 aa8.3□□□□□ -1.08
KPNB1-202ENST00000535458 CNIH4Q9P003 139 aa8.3□□□□□ -1.08
KPNB1-202ENST00000535458 PTPRSQ13332 1948 aa8.3□□□□□ -1.08
KPNB1-202ENST00000535458 A0A0G2JPF8 293 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 A0A1W2PS29 197 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 SNTNA6NMZ2 147 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 HNRNPCL2B2RXH8 293 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 HNRNPCL3B7ZW38 293 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 C4orf51C9J302 202 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 POLR1CO15160 346 aaPredicted RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ORC5O43913 435 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 HNRNPCL4P0DMR1 293 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ARSBP15848 533 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ALAS2P22557 587 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 RPS5P46782 204 aaKnown RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ANXA11P50995 505 aaKnown RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ZNF81P51508 661 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 PRDX1Q06830 199 aaKnown RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 SLC9A5Q14940 896 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 MINDY4Q4G0A6 757 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 C1orf53Q5VUE5 145 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 QSOX2Q6ZRP7 698 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 CHMP1BQ7LBR1 199 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 CACUL1Q86Y37 369 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ZNF431Q8TF32 576 aaPredicted RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 C12orf66Q96MD2 445 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 TBX5Q99593 518 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 DHRS9Q9BPW9 319 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 MED18Q9BUE0 208 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 PINK1Q9BXM7 581 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 MED28Q9H204 178 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 OSGEPL1Q9H4B0 414 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 KLHL1Q9NR64 748 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 MGAT4AQ9UM21 535 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 GSTK1Q9Y2Q3 226 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 GPR55Q9Y2T6 319 aaPredicted RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 EXOSC1Q9Y3B2 195 aaKnown RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ATG4BQ9Y4P1 393 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 A0A1W2PR48 441 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 IRGMA1A4Y4 181 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 CPSF4LA6NMK7 179 aaKnown RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 CASC3O15234 703 aaKnown RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ERI3O43414 337 aaKnown RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 LATO43561 262 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 UBXN7O94888 489 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 LIMS3P0CW19 117 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 LIMS4P0CW20 117 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 SOX18P35713 384 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 HTRA4P83105 476 aaPredicted RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 GNA13Q14344 377 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 FCN2Q15485 313 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.29□□□□□ -1.082e-7■■■□□ 18.3
KPNB1-202ENST00000535458 ZNF311Q5JNZ3 666 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 IDNKQ5T6J7 187 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 KIAA1161Q6NSJ0 714 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 TMEM107Q6UX40 140 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ZNF730Q6ZMV8 503 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 VRK2Q86Y07 508 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 RDH10Q8IZV5 341 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 OR2A1Q8NGT9 310 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 PIGKQ92643 395 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 KLK6Q92876 244 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ZG16BQ96DA0 208 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 CNRIP1Q96F85 164 aaPredicted RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 FAM46AQ96IP4 442 aaKnown RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 SLC38A2Q96QD8 506 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 INSM2Q96T92 566 aaPredicted RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ARHGAP9Q9BRR9 750 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 TMEM245Q9H330 911 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ISYNA1Q9NPH2 558 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ATP13A2Q9NQ11 1180 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 EQTNQ9NQ60 294 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 SEMA4GQ9NTN9 838 aa8.29□□□□□ -1.08
KPNB1-202ENST00000535458 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.29□□□□□ -1.08
KPNB1-202ENST00000535458 OR7A10O76100 309 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 ACP5P13686 325 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 HOXB3P14651 431 aaPredicted RBP8.28□□□□□ -1.08
KPNB1-202ENST00000535458 GABRA5P31644 462 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 CTNNB1P35222 781 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 IFNGR2P38484 337 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 BCL6P41182 706 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 MLLT3P42568 568 aaPredicted RBP8.28□□□□□ -1.08
KPNB1-202ENST00000535458 TSPAN31Q12999 210 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 ZMYND11Q15326 602 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 MLF2Q15773 248 aaPredicted RBP8.28□□□□□ -1.08
KPNB1-202ENST00000535458 DUSP6Q16828 381 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 ZNF791Q3KP31 576 aaPredicted RBP8.28□□□□□ -1.08
KPNB1-202ENST00000535458 ZNF628Q5EBL2 1059 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 BHLHB9Q6PI77 547 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 TMEM64Q6YI46 380 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 RRM2BQ7LG56 351 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 MRGPREQ86SM8 312 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 MARCH9Q86YJ5 346 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 RAB42Q8N4Z0 105 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 LRRC17Q8N6Y2 441 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 TMEM145Q8NBT3 493 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 SUSD6Q92537 303 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 AP3S1Q92572 193 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 ARMC5Q96C12 935 aa8.28□□□□□ -1.08
KPNB1-202ENST00000535458 TRMT61BQ9BVS5 477 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms