RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	FRG2	Q64ET8	278 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	SLC48A1	Q6P1K1	146 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	ANGPTL8	Q6UXH0	198 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	PAGE2	Q7Z2X7	111 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	PIGW	Q7Z7B1	504 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	YRDC	Q86U90	279 aa	Known RBP	10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	VWA5B2	Q8N398	1253 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	METTL4	Q8N3J2	472 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	KCTD4	Q8WVF5	259 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	DTNBP1	Q96EV8	351 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	LCOR	Q96JN0	433 aa	Predicted RBP	10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	FRG2B	Q96QU4	278 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	NODAL	Q96S42	347 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	SMR3A	Q99954	134 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	TUBA1C	Q9BQE3	449 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	G6PC3	Q9BUM1	346 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	GALNT8	Q9NY28	637 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	CLCF1	Q9UBD9	225 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	NDRG3	Q9UGV2	375 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	DTX4	Q9Y2E6	619 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	PCDHA9	Q9Y5H5	950 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	FREM3	P0C091	2139 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647		A0A1B0GTL3	188 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	C1orf226	A1L170	272 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	LRRC14B	A6NHZ5	514 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	VSTM5	A8MXK1	200 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	OR7A17	O14581	309 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	CASK	O14936	926 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	SNX3	O60493	162 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	DNAJC8	O75937	253 aa	Predicted RBP	10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	SERPINE1	P05121	402 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	CRH	P06850	196 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	HEXA	P06865	529 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	KLK1	P06870	262 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	RBP1	P09455	135 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	CSNK2A2	P19784	350 aa	Predicted RBP	10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	NT5E	P21589	574 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	GRK2	P25098	689 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	ADSL	P30566	484 aa	Predicted RBP	10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	PRKAA2	P54646	552 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	DIO3	P55073	304 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	PSPH	P78330	225 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	BCL2A1	Q16548	175 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	CCNYL2	Q5T2Q4	361 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	PRSS57	Q6UWY2	283 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	CLEC9A	Q6UXN8	241 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	PRR22	Q8IZ63	422 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	PLD6	Q8N2A8	252 aa	Known RBP	10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	OMA1	Q96E52	524 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	MECR	Q9BV79	373 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	OSBPL11	Q9BXB4	747 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	NOL11	Q9H8H0	719 aa	Known RBP	10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	ZFAND3	Q9H8U3	227 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	MAT2B	Q9NZL9	334 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	KLHL14	Q9P2G3	628 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	PSME2	Q9UL46	239 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	EMCN	Q9ULC0	261 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	PCDHB10	Q9UN67	800 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	DLGAP4	Q9Y2H0	992 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	ARL2BP	Q9Y2Y0	163 aa		10.47	□□□□□ -0.73
CTNND1-238	ENST00000534647	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	TRAV20	A0A0B4J274	112 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	OR6C70	A6NIJ9	312 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	STX16-NPEPL1	H3BU86	382 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	STX16	O14662	325 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	MSTN	O14793	375 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	HCRTR2	O43614	444 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	UGT2B11	O75310	529 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	TNFSF13	O75888	250 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	SIX3	O95343	332 aa	Predicted RBP	10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	ZNF708	P17019	499 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	SRD5A2	P31213	254 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	HTR3A	P46098	478 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	LHX2	P50458	406 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	MAPK12	P53778	367 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	TRA2B	P62995	288 aa	Known RBP	10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	HMGCS1	Q01581	520 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	SF3A3	Q12874	501 aa	Known RBP eCLIP	10.46	□□□□□ -0.73	2e-7	■■■□□ 16.4
CTNND1-238	ENST00000534647	PCLAF	Q15004	111 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	GGTA1P	Q4G0N0	100 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	AAGAB	Q6PD74	315 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	FAM111B	Q6SJ93	734 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	ZYG11A	Q6WRX3	759 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	CCDC121	Q6ZUS5	278 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	PLCZ1	Q86YW0	608 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	C10orf107	Q8IVU9	208 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	GBP7	Q8N8V2	638 aa	Predicted RBP	10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	OR14L1P	Q8NHC6	308 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	RNF138	Q8WVD3	245 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	PIGT	Q969N2	578 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	INTS12	Q96CB8	462 aa	Known RBP	10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	TMCO6	Q96DC7	493 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	ERP27	Q96DN0	273 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	C7orf26	Q96N11	449 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	MRPL57	Q9BQC6	102 aa	Known RBP	10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	MRPL1	Q9BYD6	325 aa	Known RBP	10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	GSX2	Q9BZM3	304 aa		10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	MRPL46	Q9H2W6	279 aa	Known RBP	10.46	□□□□□ -0.73
CTNND1-238	ENST00000534647	GALNT9	Q9HCQ5	603 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms