RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	SLC13A2	Q13183	592 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	RUNX2	Q13950	521 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	SF3B4	Q15427	424 aa	Known RBP eCLIP	5.49	□□□□□ -1.53	8e-8	■■■■□ 23.9
PICALM-223	ENST00000534412	TPSAB1	Q15661	275 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	MORN5	Q5VZ52	161 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	DUPD1	Q68J44	220 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	PEX26	Q7Z412	305 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	DENND6A	Q8IWF6	608 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	LMNTD2	Q8IXW0	634 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	PM20D2	Q8IYS1	436 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	DND1	Q8IYX4	353 aa	Known RBP	5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	ZNF321P	Q8N8H1	164 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	CCDC89	Q8N998	374 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	OR5L2	Q8NGL0	311 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	NUBPL	Q8TB37	319 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	IGFBPL1	Q8WX77	278 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	KIAA1191	Q96A73	305 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	PYCR2	Q96C36	320 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	SPACA9	Q96E40	222 aa	Predicted RBP	5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	C1GALT1C1	Q96EU7	318 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	HES6	Q96HZ4	224 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	CAPZA3	Q96KX2	299 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	SECISBP2	Q96T21	854 aa	Known RBP	5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	SFXN3	Q9BWM7	321 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	TSGA10	Q9BZW7	698 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	CCDC68	Q9H2F9	335 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	UBQLN3	Q9H347	655 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	EXO5	Q9H790	373 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	PELI2	Q9HAT8	420 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	FBXO6	Q9NRD1	293 aa	Predicted RBP	5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	PRTFDC1	Q9NRG1	225 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	CNIH4	Q9P003	139 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	XPR1	Q9UBH6	696 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	NDRG4	Q9ULP0	352 aa	Known RBP	5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	PACSIN2	Q9UNF0	486 aa	Predicted RBP	5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	ZNF148	Q9UQR1	794 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	MRPS33	Q9Y291	106 aa	Known RBP	5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.49	□□□□□ -1.53	8e-13	■■■■□ 20.2
PICALM-223	ENST00000534412	CLCA3P	Q9Y6N3	262 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	RTTN	Q86VV8	2226 aa		5.49	□□□□□ -1.53
PICALM-223	ENST00000534412	C15orf38-AP3S2	A0A0A6YYH1	394 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	ZCWPW2	A0A1B0GU75	182 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	CTAGE9	A4FU28	777 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	DEFB108A	A8MXU0	73 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	CTIF	O43310	598 aa	Known RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	CTNS	O60931	367 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	TRIM3	O75382	744 aa	Predicted RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	SOX30	O94993	753 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	TBX6	O95947	436 aa	Predicted RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	C1QA	P02745	245 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	IGKV3-11	P04433	115 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	HPN	P05981	417 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	HIST1H2AD	P20671	130 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	GSTM2	P28161	218 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	HNRNPH1	P31943	449 aa	Known RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	MAGEA6	P43360	314 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	RGS4	P49798	205 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	NAP1L1	P55209	391 aa	Known RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	STXBP1	P61764	594 aa	Known RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	BTN3A2	P78410	334 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	BASP1	P80723	227 aa	Known RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	SSBP2	P81877	361 aa	Predicted RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	CSHL1	Q14406	222 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	CAPRIN1	Q14444	709 aa	Known RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	ACKR1	Q16570	336 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	ADPRM	Q3LIE5	342 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	PIGG	Q5H8A4	983 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	PRAMEF20	Q5VT98	475 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	SLC22A10	Q63ZE4	541 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	HEPHL1	Q6MZM0	1159 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	SLC18B1	Q6NT16	456 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	UGT3A1	Q6NUS8	523 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	PODNL1	Q6PEZ8	512 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	C4orf22	Q6V702	233 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	C9orf40	Q8IXQ3	194 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	SYCE1	Q8N0S2	351 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	RASGEF1C	Q8N431	466 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	LIX1	Q8N485	282 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	SLC15A4	Q8N697	577 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	PNLDC1	Q8NA58	520 aa	Known RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	FAM47B	Q8NA70	645 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	SLC2A12	Q8TD20	617 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	ZNF721	Q8TF20	911 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	EEF1AKMT1	Q8WVE0	214 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	ATL1	Q8WXF7	558 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	TMEM158	Q8WZ71	300 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	FBXL8	Q96CD0	374 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	R3HDM4	Q96D70	268 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	MS4A6E	Q96DS6	147 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	DAZAP1	Q96EP5	407 aa	Known RBP	5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	PERP	Q96FX8	193 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	ZFP3	Q96NJ6	502 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	QRFPR	Q96P65	431 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	CSF3R	Q99062	836 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	CCL19	Q99731	98 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	AIF1L	Q9BQI0	150 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	H2AFJ	Q9BTM1	129 aa		5.48	□□□□□ -1.53
PICALM-223	ENST00000534412	DPCD	Q9BVM2	203 aa	Predicted RBP	5.48	□□□□□ -1.53

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