RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 TRMOQ9BU70 441 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 RTN4RQ9BZR6 473 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 IQCGQ9H095 443 aaKnown RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 CXXC4Q9H2H0 198 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 PIGMQ9H3S5 423 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 TUBB1Q9H4B7 451 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 REEP4Q9H6H4 257 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 EQTNQ9NQ60 294 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 GALNT8Q9NY28 637 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 PLEKHA6Q9Y2H5 1048 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 DNAJC15Q9Y5T4 150 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 HCFC1P51610 2035 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 NINQ8N4C6 2090 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 INTS1Q8N201 2190 aaKnown RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 SPG11Q96JI7 2443 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 GXYLT2A0PJZ3 443 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 OR2M5A3KFT3 312 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 SLC22A20A6NK97 555 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 H0YC42 278 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 LINC01387J3KSC0 135 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 HCRTR2O43614 444 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 TNFSF13O75888 250 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 UTS2O95399 124 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 ANGPTL1O95841 491 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 CRHP06850 196 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 FGF4P08620 206 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 IFI6P09912 130 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 CD99P14209 185 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 SDC1P18827 310 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 SUCLG1P53597 346 aaKnown RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 DIO3P55073 304 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 TPD52P55327 224 aaPredicted RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 CLDN15P56746 228 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 EEFSECP57772 596 aaKnown RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 RPL38P63173 70 aaKnown RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 C17orf67Q0P5P2 114 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 GANABQ14697 944 aaKnown RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 GALNTL6Q49A17 601 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 VPS26BQ4G0F5 336 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 ZNF385BQ569K4 471 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 OR2A2Q6IF42 318 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 APOOLQ6UXV4 268 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 HOMEZQ8IX15 550 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 MEIOBQ8N635 442 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 CHDHQ8NE62 594 aaPredicted RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 OR5M1Q8NGP8 315 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 OR2W6PQ8NHA6 318 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 CLHC1Q8NHS4 586 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 ZFP28Q8NHY6 868 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 PIK3R3Q92569 461 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 SLC9A6Q92581 669 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 CIDECQ96AQ7 238 aaPredicted RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 PPCDCQ96CD2 204 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 STARD4Q96DR4 205 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 ZBED6CLQ96FA7 236 aaPredicted RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 ZNF764Q96H86 408 aaPredicted RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 DACH2Q96NX9 599 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 YIPF4Q9BSR8 244 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 TBL1XR1Q9BZK7 514 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 L2HGDHQ9H9P8 463 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 NDRG3Q9UGV2 375 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 PACSIN3Q9UKS6 424 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 TRAF6Q9Y4K3 522 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 NCKAP5O14513 1909 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 A0A1W2PNV4 684 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 H3BML4 177 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 MSTNO14793 375 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 CASKO14936 926 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 SEC14L5O43304 696 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 GMFGO60234 142 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 TBX19O60806 448 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 TNFRSF21O75509 655 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 SMNDC1O75940 238 aaKnown RBP eCLIP8.04□□□□□ -1.12
COPB1-211ENST00000534234 NKX2-2O95096 273 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 IGKV1D-16P01601 117 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 CHRNGP07510 517 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 NEFHP12036 1026 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 ALDH3A1P30838 453 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 MAP3K8P41279 467 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 FRKP42685 505 aaPredicted RBP8.04□□□□□ -1.12
COPB1-211ENST00000534234 CLDN20P56880 219 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 PRR5P85299 388 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 FAM27E3Q08E93 113 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 GRAMD1BQ3KR37 738 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 UGT3A2Q3SY77 523 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 GLYR1Q49A26 553 aaPredicted RBP8.04□□□□□ -1.12
COPB1-211ENST00000534234 ARL13AQ5H913 290 aaPredicted RBP8.04□□□□□ -1.12
COPB1-211ENST00000534234 KANK2Q63ZY3 851 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 RNF165Q6ZSG1 346 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 SZRD1Q7Z422 152 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 GALNT10Q86SR1 603 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 DDIASQ8IXT1 998 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 CNEP1R1Q8N9A8 125 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 BANPQ8N9N5 519 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 CDRT4Q8N9R6 151 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 SLC16A11Q8NCK7 471 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 NUP43Q8NFH3 380 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 OR4C3Q8NH37 302 aa8.04□□□□□ -1.12
COPB1-211ENST00000534234 FIG4Q92562 907 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms