RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CBR3O75828 277 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 SOX30O94993 753 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 NGFRP08138 427 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 KRT16P08779 473 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 LCN1P31025 176 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 S100A3P33764 101 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 ZFP36L2P47974 494 aaKnown RBP18.64■□□□□ 0.57
CCS-208ENST00000533244 MRPL19P49406 292 aaKnown RBP18.64■□□□□ 0.57
CCS-208ENST00000533244 ADORA2A-AS1P86434 159 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 BHLHB9Q6PI77 547 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 ANKRD46Q86W74 232 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 COX18Q8N8Q8 333 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 OR4A15Q8NGL6 344 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 GOT1L1Q8NHS2 421 aaPredicted RBP18.64■□□□□ 0.57
CCS-208ENST00000533244 JADE3Q92613 823 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 SARAFQ96BY9 339 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 MARK4Q96L34 752 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 CCDC115Q96NT0 180 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 BTBD2Q9BX70 525 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 RTN4RQ9BZR6 473 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 SERHLQ9NQF3 203 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 RNF103-CHMP3A0A140T963 221 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 C9JVG2 144 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 UBDO15205 165 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 UTS2O95399 124 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 PGRP06401 933 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 SOAT1P35610 550 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 IDH3AP50213 366 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 DGKQP52824 942 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 POU6F2P78424 691 aaPredicted RBP18.63■□□□□ 0.57
CCS-208ENST00000533244 GXYLT1Q4G148 440 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 ACAD11Q709F0 780 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 ZAR1Q86SH2 424 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 ITLN2Q8WWU7 325 aaPredicted RBP18.63■□□□□ 0.57
CCS-208ENST00000533244 STON2Q8WXE9 905 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 CDS1Q92903 461 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 EBF4Q9BQW3 602 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 OR2B2Q9GZK3 357 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 TP63Q9H3D4 680 aaPredicted RBP18.63■□□□□ 0.57
CCS-208ENST00000533244 SERHL2Q9H4I8 314 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 TCF7L2Q9NQB0 619 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 PNPLA3Q9NST1 481 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 PCDHGB4Q9UN71 923 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 FAF1Q9UNN5 650 aaPredicted RBP18.63■□□□□ 0.57
CCS-208ENST00000533244 PCDHGB3Q9Y5G1 929 aa18.63■□□□□ 0.57
CCS-208ENST00000533244 PCNX1Q96RV3 2341 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 C17orf51A8MQB3 221 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 SLC22A3O75751 556 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 RFX3P48380 749 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 TRPC1P48995 793 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 GRAMD1BQ3KR37 738 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 EIPR1Q53HC9 387 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 NHSL2Q5HYW2 709 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 FIGNL1Q6PIW4 674 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 APOOLQ6UXV4 268 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 RPTNQ6XPR3 784 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 C3P1Q6ZMU1 363 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 C6orf120Q7Z4R8 191 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 EID3Q8N140 333 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 FADS6Q8N9I5 356 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 FAM83FQ8NEG4 500 aaPredicted RBP18.62■□□□□ 0.57
CCS-208ENST00000533244 MIPOL1Q8TD10 442 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 ADAMTS15Q8TE58 950 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 OR7D2Q96RA2 312 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 ZBTB18Q99592 522 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 CCDC28BQ9BUN5 200 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 EXO5Q9H790 373 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 FBXO34Q9NWN3 711 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 TNFRSF10DQ9UBN6 386 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 FBXL2Q9UKC9 423 aa18.62■□□□□ 0.57
CCS-208ENST00000533244 ALG1L2C9J202 215 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 POLR3GO15318 223 aaPredicted RBP18.61■□□□□ 0.57
CCS-208ENST00000533244 SCO2O43819 266 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 TRAPPC6AO75865 159 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 CLDN1O95832 211 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 ESRRAP11474 423 aaPredicted RBP18.61■□□□□ 0.57
CCS-208ENST00000533244 UQCRC2P22695 453 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 AQP5P55064 265 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 CRYZQ08257 329 aaKnown RBP18.61■□□□□ 0.57
CCS-208ENST00000533244 LRRC74AQ0VAA2 488 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 GALNT10Q86SR1 603 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 CLEC4FQ8N1N0 589 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 OR4C3Q8NH37 302 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 G6PC3Q9BUM1 346 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 MRPS18CQ9Y3D5 142 aaKnown RBP18.61■□□□□ 0.57
CCS-208ENST00000533244 KCNE3Q9Y6H6 103 aa18.61■□□□□ 0.57
CCS-208ENST00000533244 IGLV3-32A0A0A0MS00 114 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 EDF1O60869 148 aaKnown RBP18.6■□□□□ 0.57
CCS-208ENST00000533244 CPSF4O95639 269 aaKnown RBP18.6■□□□□ 0.57
CCS-208ENST00000533244 OXSR1O95747 527 aaPredicted RBP18.6■□□□□ 0.57
CCS-208ENST00000533244 IL6P05231 212 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 TBXA2RP21731 343 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 SRD5A2P31213 254 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 WIPI1Q5MNZ9 446 aaPredicted RBP18.6■□□□□ 0.57
CCS-208ENST00000533244 CCNJQ5T5M9 372 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 WLSQ5T9L3 541 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 SAXO2Q658L1 398 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 VASNQ6EMK4 673 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 OR5M10Q6IEU7 315 aa18.6■□□□□ 0.57
CCS-208ENST00000533244 NCCRP1Q6ZVX7 275 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms