RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 CACNA1CQ13936 2221 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 IGHV1-45A0A0A0MS14 117 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 OR5H15A6NDH6 313 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 SLC19A2O60779 497 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 MED26O95402 600 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 WDPCPO95876 746 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 TGFB1P01137 390 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 CATP04040 527 aaKnown RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 ETFAP13804 333 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 CCNA2P20248 432 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 FBLP22087 321 aaKnown RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 CXCR2P25025 360 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 TTKP33981 857 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 GSSP48637 474 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 BMXP51813 675 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 EMP2P54851 167 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 VSX2P58304 361 aaPredicted RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 E2F2Q14209 437 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 RGNQ15493 299 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 MSANTD1Q6ZTZ1 278 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 FKBP9P1Q75LS8 142 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 HIPK1Q86Z02 1210 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 LRRC56Q8IYG6 542 aaPredicted RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 ACBD4Q8NC06 268 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 FAM81AQ8TBF8 368 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 ADAMTS18Q8TE60 1221 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 MAGED4Q96JG8 741 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 ALOXE3Q9BYJ1 711 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 CCDC90BQ9GZT6 254 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 GABARAPL1Q9H0R8 117 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 FAM120CQ9NX05 1096 aaKnown RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 RHBDL2Q9NX52 303 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 SH3BP4Q9P0V3 963 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 SAMHD1Q9Y3Z3 626 aaKnown RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 KLK4Q9Y5K2 254 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 CNTRLQ7Z7A1 2325 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 HIVEP1P15822 2718 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 LOC102723996A0A087X1L8 192 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 GNG14A0A1W2PPG7 69 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 BCAS1O75363 584 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 ANGPTL1O95841 491 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 TBX6O95947 436 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 FABP3P05413 133 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 ITGAMP11215 1152 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 ACVR2AP27037 513 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 TIA1P31483 386 aaKnown RBP eCLIP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 RYKP34925 604 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 TGFBR1P36897 503 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 HNF4AP41235 474 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 OR1E2P47887 323 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 TMBIM6P55061 237 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 C21orf58P58505 322 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 TLE4Q04727 773 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 EEF1A2Q05639 463 aaKnown RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 SLBPQ14493 270 aaKnown RBP eCLIP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 CTF1Q16619 201 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 CPTPQ5TA50 214 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 CAPN13Q6MZZ7 669 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 UNC5DQ6UXZ4 953 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 EIF3MQ7L2H7 374 aaKnown RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 COMMD6Q7Z4G1 85 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 VN1R5Q7Z5H4 357 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 DCUN1D3Q8IWE4 304 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 KLHDC8AQ8IYD2 350 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 PRSS58Q8IYP2 241 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 OR5AK3PQ8NH89 298 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 FNDC8Q8TC99 324 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 THAP3Q8WTV1 239 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 COQ8BQ96D53 544 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 NODALQ96S42 347 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 TREX2Q9BQ50 279 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 RAB11FIP5Q9BXF6 653 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 RSPO3Q9BXY4 272 aaPredicted RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 ENKD1Q9H0I2 346 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF700Q9H0M5 742 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 RASSF1Q9NS23 344 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 C14orf105Q9NVL8 296 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 RLIMQ9NVW2 624 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 THUMPD1Q9NXG2 353 aaKnown RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 AP3M1Q9Y2T2 418 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 MEMO1Q9Y316 297 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 PCDHGB6Q9Y5F9 930 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 NINQ8N4C6 2090 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 PRMT3O60678 531 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 CTSVO60911 334 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 WBP4O75554 376 aaKnown RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 C6orf47O95873 294 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 F10P00742 488 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 ICAM2P13598 275 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 FPR1P21462 350 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 RANBP1P43487 201 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 HNRNPFP52597 415 aaKnown RBP7.63□□□□□ -1.19
NEDD8-207ENST00000533242 RAD23AP54725 363 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 GABARAPL2P60520 117 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 SLC35A2P78381 396 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 MVKQ03426 396 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 TAP2Q03519 686 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 PCDH1Q08174 1060 aa7.63□□□□□ -1.19
NEDD8-207ENST00000533242 EPS8Q12929 822 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms