RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 OR52E6Q96RD3 313 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 BTBD2Q9BX70 525 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 ZNF385DQ9H6B1 395 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 CCDC134Q9H6E4 229 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 SLC6A13Q9NSD5 602 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 SPRR3Q9UBC9 169 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 TINAGQ9UJW2 476 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 WIF1Q9Y5W5 379 aa12.71□□□□□ -0.37
TSPAN4-220ENST00000532375 PHF3Q92576 2039 aaKnown RBP12.71□□□□□ -0.38
TSPAN4-220ENST00000532375 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 RNF103-CHMP3A0A140T963 221 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 A0A1B0GUH1 482 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 AQP7O14520 342 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 POLR3GO15318 223 aaPredicted RBP12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 HCN1O60741 890 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 AGFG2O95081 481 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 KCNH1O95259 989 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 UTS2O95399 124 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 NGFRP08138 427 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 UQCRC2P22695 453 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 ELAVL4P26378 380 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 EVI2BP34910 448 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 KRT20P35900 424 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 RPS26P62854 115 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 RBPJQ06330 500 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 CCNJQ5T5M9 372 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 FIGNL1Q6PIW4 674 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 ACAD11Q709F0 780 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 PLCZ1Q86YW0 608 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 MIER2Q8N344 545 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 ARFGAP2Q8N6H7 521 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 FADS6Q8N9I5 356 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 VPS37AQ8NEZ2 397 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 OR5D16Q8NGK9 328 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 OR1J4Q8NGS1 313 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 NEIL3Q8TAT5 605 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 NEURL3Q96EH8 262 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 THOC1Q96FV9 657 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 DMRTA2Q96SC8 542 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 SLC6A15Q9H2J7 730 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 KLRF1Q9NZS2 232 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 TNFRSF10DQ9UBN6 386 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 FBXL2Q9UKC9 423 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 ABCG2Q9UNQ0 655 aa12.7□□□□□ -0.38
TSPAN4-220ENST00000532375 TRGV5A0A0B4J1U4 118 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 TRGV8A0A0C4DH27 118 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 FAM234BA2RU67 622 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 PRAMEF27A3QJZ7 478 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 OR14I1A6ND48 311 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 CCDC154A6NI56 674 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 ALG1L2C9J202 215 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 NPIPB9F8W1W9 429 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 ZIC3O60481 467 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 CBR3O75828 277 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 IL6P05231 212 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 HOXB9P17482 250 aaPredicted RBP12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 TBXA2RP21731 343 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 MATN1P21941 496 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 GDF1P27539 372 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 MASP1P48740 699 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 POLR2JP52435 117 aaKnown RBP12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 MVDP53602 400 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 PSMD4P55036 377 aaKnown RBP12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 POU6F2P78424 691 aaPredicted RBP12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 GUCY1A3Q02108 690 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 SPDYE7PQ495Y7 208 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 GXYLT1Q4G148 440 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 EIPR1Q53HC9 387 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 OR5M10Q6IEU7 315 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 HEPHL1Q6MZM0 1159 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 MARCH3Q86UD3 253 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 FJX1Q86VR8 437 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 COX18Q8N8Q8 333 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 CHDHQ8NE62 594 aaPredicted RBP12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 ADAMTS15Q8TE58 950 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 SSC4DQ8WTU2 575 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 SDF2Q99470 211 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 OR2B2Q9GZK3 357 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 MRTO4Q9UKD2 239 aaKnown RBP12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 PCDHGB4Q9UN71 923 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 FAF1Q9UNN5 650 aaPredicted RBP12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 HEATR5AQ86XA9 2040 aa12.69□□□□□ -0.38
TSPAN4-220ENST00000532375 IGLV3-32A0A0A0MS00 114 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 NPIPA2E9PIF3 369 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 NPIPA3F8WFD2 350 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 CCL21O00585 134 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 SCO2O43819 266 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 SOX30O94993 753 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 OXSR1O95747 527 aaPredicted RBP12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 GSNP06396 782 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 ABOP16442 354 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 LCN1P31025 176 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 SOAT1P35610 550 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 RFX3P48380 749 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 TRPC1P48995 793 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 ATP4BP51164 291 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 CASP9P55211 416 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 ADORA2A-AS1P86434 159 aa12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 CRYZQ08257 329 aaKnown RBP12.68□□□□□ -0.38
TSPAN4-220ENST00000532375 FUT5Q11128 374 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms