RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	GPR12	P47775	334 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	TGM4	P49221	684 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MLF1	P58340	268 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	AP3S2	P59780	193 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	HERVK_113	P63132	956 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ERVK-25	P63136	954 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MRPS25	P82663	173 aa	Known RBP	4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	EXOC3L4	Q17RC7	722 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PTPN20	Q4JDL3	420 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	C2CD6	Q53TS8	623 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ACTBL2	Q562R1	376 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MIIP	Q5JXC2	388 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ZCCHC11	Q5TAX3	1644 aa	Known RBP	4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GGNBP1	Q5YKI7	109 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	DENND2C	Q68D51	928 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	C3orf62	Q6ZUJ4	267 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	UTS2B	Q765I0	119 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CLEC4F	Q8N1N0	589 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	D2HGDH	Q8N465	521 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CNBD1	Q8NA66	436 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	THAP8	Q8NA92	274 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CCDC197	Q8NCU1	140 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	NEU4	Q8WWR8	484 aa	Predicted RBP	4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	NAT6	Q93015	286 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ZNF512	Q96ME7	567 aa	Predicted RBP	4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ZNF578	Q96N58	590 aa	Predicted RBP	4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ERVK-6	Q9BXR3	956 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	TOLLIP	Q9H0E2	274 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967		Q9H8V8	135 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ECHDC1	Q9NTX5	307 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PCMTD2	Q9NV79	361 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	STMN3	Q9NZ72	180 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	C3orf18	Q9UK00	162 aa		4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	FAF1	Q9UNN5	650 aa	Predicted RBP	4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ZFR2	Q9UPR6	939 aa	Known RBP	4.8	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MYO3A	Q8NEV4	1616 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	INO80	Q9ULG1	1556 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PTPRT	O14522	1441 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967		A0A096LPK6	155 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CCT8L1P	A6NM43	557 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	RFXANK	O14593	260 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CLOCK	O15516	846 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SYT7	O43581	403 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	RGS11	O94810	467 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	HPR	P00739	348 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GAPDH	P04406	335 aa	Known RBP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	F13B	P05160	661 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	HOXB4	P17483	251 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ATF6	P18850	670 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MSH3	P20585	1137 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GATA3	P23771	443 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	G0S2	P27469	103 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GJB2	P29033	226 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	TACR3	P29371	465 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CEACAM3	P40198	252 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SLC1A2	P43004	574 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	RGR	P47804	291 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	METAP2	P50579	478 aa	Known RBP eCLIP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	UCN	P55089	124 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	VSNL1	P62760	191 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MESD	Q14696	234 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ANXA2R	Q3ZCQ2	193 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GLYR1	Q49A26	553 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	KIAA1755	Q5JYT7	1200 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	DHRS13	Q6UX07	377 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967		Q6ZUG5	572 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MON1B	Q7L1V2	547 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	KCNMB4	Q86W47	210 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	CDK20	Q8IZL9	346 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	EMC1	Q8N766	993 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	LRRC75A	Q8NAA5	344 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SLC38A9	Q8NBW4	561 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SCCPDH	Q8NBX0	429 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	OR56A1	Q8NGH5	318 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PPP4R1	Q8TF05	950 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SORCS1	Q8WY21	1168 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	FAM131C	Q96AQ9	280 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	METTL2A	Q96IZ6	378 aa	Known RBP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	HRASLS5	Q96KN8	279 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	IL4I1	Q96RQ9	567 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ZNF251	Q9BRH9	671 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	UGT1A10	Q9HAW8	530 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MRPL39	Q9NYK5	338 aa	Known RBP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	KLHL13	Q9P2N7	655 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	GNG12	Q9UBI6	72 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	RAB23	Q9ULC3	237 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	RIPK3	Q9Y572	518 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PTGDR2	Q9Y5Y4	395 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ZFYVE16	Q7Z3T8	1539 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	SH3PXD2B	A1X283	911 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	HMX2	A2RU54	273 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	PRSS37	A4D1T9	235 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	ARGFX	A6NJG6	315 aa		4.79	□□□□□ -1.64
ECHDC1-222	ENST00000531967	MSI1	O43347	362 aa	Known RBP	4.79	□□□□□ -1.64

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