RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 HPS1Q92902 700 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 RERGQ96A58 199 aaPredicted RBP16.06■□□□□ 0.16
BRCA2-204ENST00000530893 KCTD7Q96MP8 289 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 SDF2Q99470 211 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 SDHCQ99643 169 aaPredicted RBP16.06■□□□□ 0.16
BRCA2-204ENST00000530893 COQ7Q99807 217 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 ARHGAP9Q9BRR9 750 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 ZNF350Q9GZX5 532 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 DUSP22Q9NRW4 184 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 GPR52Q9Y2T5 361 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 CDH10Q9Y6N8 788 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 LRRC72A6NJI9 287 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 WWP2O00308 870 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 SLC30A4O14863 429 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 RGS5O15539 181 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 DBIP07108 87 aaKnown RBP16.06■□□□□ 0.16
BRCA2-204ENST00000530893 GNSP15586 552 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 GABRA5P31644 462 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 CDH11P55287 796 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 SIM1P81133 766 aaPredicted RBP16.06■□□□□ 0.16
BRCA2-204ENST00000530893 MLLT1Q03111 559 aaPredicted RBP16.06■□□□□ 0.16
BRCA2-204ENST00000530893 DSG2Q14126 1118 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 ZNF836Q6ZNA1 936 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 NRMQ8IXM6 262 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 RNF113BQ8IZP6 322 aaKnown RBP16.06■□□□□ 0.16
BRCA2-204ENST00000530893 ZNF619Q8N2I2 560 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 OR2T33Q8NG76 320 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 STACQ99469 402 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 POT1Q9NUX5 634 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 C2orf74A8MZ97 194 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 CHST10O43529 356 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 PLOD3O60568 738 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 KCNK2O95069 426 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 AK1P00568 194 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 THY1P04216 161 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 GAAP10253 952 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 POLR2CP19387 275 aaPredicted RBP16.05■□□□□ 0.16
BRCA2-204ENST00000530893 NDUFV2P19404 249 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 RPS4Y1P22090 263 aaKnown RBP16.05■□□□□ 0.16
BRCA2-204ENST00000530893 FGF9P31371 208 aaPredicted RBP16.05■□□□□ 0.16
BRCA2-204ENST00000530893 AKT2P31751 481 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 SLC9A3P48764 834 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 ACSM1Q08AH1 577 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 ILF3Q12906 894 aaKnown RBP eCLIP16.05■□□□□ 0.16
BRCA2-204ENST00000530893 GPR18Q14330 331 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 PGGHGQ32M88 737 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 FHL5Q5TD97 284 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 NXNL2Q5VZ03 156 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 HSDL2Q6YN16 418 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 CDRT4Q8N9R6 151 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 MSLNLQ96KJ4 702 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 JAM3Q9BX67 310 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 EVA1AQ9H8M9 152 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 MSRAQ9UJ68 235 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 EXOGQ9Y2C4 368 aaKnown RBP16.05■□□□□ 0.16
BRCA2-204ENST00000530893 CA5BQ9Y2D0 317 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 CARD8Q9Y2G2 431 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 GSTK1Q9Y2Q3 226 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 SF3B6Q9Y3B4 125 aaKnown RBP16.05■□□□□ 0.16
BRCA2-204ENST00000530893 CMAHPQ9Y471 501 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 SCN3AQ9NY46 2000 aa16.05■□□□□ 0.16
BRCA2-204ENST00000530893 OR6C74A6NCV1 312 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 SNPHO15079 494 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 NARSO43776 548 aaKnown RBP16.04■□□□□ 0.16
BRCA2-204ENST00000530893 FMO6PO60774 539 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 STX11O75558 287 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 CDRT1O95170 752 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 LIMS3P0CW19 117 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 LIMS4P0CW20 117 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 HTR1FP30939 366 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 ACSL1P33121 698 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 MAP4K2Q12851 820 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 ADAM15Q13444 863 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 ALG11Q2TAA5 492 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 FLYWCH1Q4VC44 716 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 CLEC12AQ5QGZ9 265 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 SLC30A6Q6NXT4 461 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 CD200R1LQ6Q8B3 271 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 QSOX2Q6ZRP7 698 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 DGLUCYQ7Z3D6 616 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 ZNF485Q8NCK3 441 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 OR4Q3Q8NH05 313 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 TMEM255BQ8WV15 326 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 ASB15Q8WXK1 588 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 TM9SF4Q92544 642 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 AP3S1Q92572 193 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 ITFG2Q969R8 447 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 SLC28A3Q9HAS3 691 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 CLEC1BQ9P126 229 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 HS3ST3A1Q9Y663 406 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 V9GYH0 126 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 TRBV23OR9-2A0A075B6M9 112 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 TRAPPC13A5PLN9 417 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 SOX30O94993 753 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 SLC1A3P43003 542 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 ZNF136P52737 540 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 HOXC5Q00444 222 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 HTR4Q13639 388 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 OR2G6Q5TZ20 316 aa16.04■□□□□ 0.16
BRCA2-204ENST00000530893 DESI1Q6ICB0 168 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms