RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 KIR2DS3K7RE56 304 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 NARSO43776 548 aaKnown RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 MITFO75030 526 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 CD63P08962 238 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 FOSL2P15408 326 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 IVDP26440 423 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 CD40LGP29965 261 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 CNR2P34972 360 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 GMPRP36959 345 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 PITPNBP48739 271 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 KIR2DS5Q14953 304 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 TAS1R1Q7RTX1 841 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 NLGN4XQ8N0W4 816 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 PAPD5Q8NDF8 572 aaKnown RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ABHD5Q8WTS1 349 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ASB12Q8WXK4 309 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 CDS1Q92903 461 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 PRR11Q96HE9 360 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 LPAR4Q99677 370 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 TIMM29Q9BSF4 260 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 NTMT1Q9BV86 223 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 RAB9BQ9NP90 201 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 HCFC1R1Q9NWW0 138 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 MRPL15Q9P015 296 aaKnown RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 GPR52Q9Y2T5 361 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 UBE2J1Q9Y385 318 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ASB4Q9Y574 426 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 hCG_1807616A0A1W2PRN6 198 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 CREBL2O60519 120 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 CA3P07451 260 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 RAB3AP20336 220 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 UQCRC1P31930 480 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ACTBP60709 375 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ACTG1P63261 375 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 NTRK2Q16620 822 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 COL28A1Q2UY09 1125 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 HAGHLQ6PII5 290 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 PARS2Q7L3T8 475 aaKnown RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ZFP41Q8N8Y5 198 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 OR52R1Q8NGF1 315 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 SLC7A13Q8TCU3 470 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 TRUB1Q8WWH5 349 aaKnown RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 DUSP23Q9BVJ7 150 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ALG8Q9BVK2 526 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 RGCCQ9H4X1 137 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ZNF175Q9Y473 711 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ANKRD28O15084 1053 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ADAMTS4O75173 837 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 TNFRSF4P43489 277 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 HES5Q5TA89 166 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 LYSMD4Q5XG99 296 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 BEST3Q8N1M1 668 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 OR4K5Q8NGD3 323 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 FAM174AQ8TBP5 190 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 C16orf58Q96GQ5 468 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 HHIPQ96QV1 700 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 OR5B2Q96R09 309 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 SULT4A1Q9BR01 284 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 HDHD5Q9BXW7 423 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 LHPPQ9H008 270 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 GPN2Q9H9Y4 310 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 STARD5Q9NSY2 213 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 NOTOA8MTQ0 251 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 CNOT4O95628 575 aaKnown RBP8.01□□□□□ -1.13
CTNND1-227ENST00000530748 C1SP09871 688 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 TNFRSF1BP20333 461 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 GPX3P22352 226 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 PRLHRP49683 370 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 VEZF1Q14119 521 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 TRIM46Q7Z4K8 759 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 GALNT6Q8NCL4 622 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 OR9Q2Q8NGE9 314 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 ERVK13-1Q9NX77 482 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 KLHL42Q9P2K6 505 aa8.01□□□□□ -1.13
CTNND1-227ENST00000530748 EFCAB7A8K855 629 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 GABBR2O75899 941 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 CER1O95813 267 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 TUBG1P23258 451 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 ADH6P28332 368 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 FNTBP49356 437 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 FOXA1P55317 472 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 CSNK2A1P68400 391 aaPredicted RBP8□□□□□ -1.13
CTNND1-227ENST00000530748 PAGE3Q5JUK9 113 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 ABHD17BQ5VST6 288 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 ZNF704Q6ZNC4 412 aaPredicted RBP8□□□□□ -1.13
CTNND1-227ENST00000530748 CNTN4Q8IWV2 1026 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 SYT14Q8NB59 555 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 NEIL2Q969S2 332 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 PRRC1Q96M27 445 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 TREX2Q9BQ50 279 aaPredicted RBP8□□□□□ -1.13
CTNND1-227ENST00000530748 RNF38Q9H0F5 515 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 TAS2R3Q9NYW6 316 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 IL17CQ9P0M4 197 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 TMX2-CTNND1H3BSU7 103 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 M0R3H8 397 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 RDH16O75452 317 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 HTR3BO95264 441 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 C1orf105O95561 183 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 CAPN3P20807 821 aa8□□□□□ -1.13
CTNND1-227ENST00000530748 CD6P30203 668 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms