RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 TSEN15Q8WW01 171 aaKnown RBP3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 DNAJA4Q8WW22 397 aaPredicted RBP3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 ST8SIA1Q92185 356 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 C12orf66Q96MD2 445 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 ALKBH3Q96Q83 286 aaPredicted RBP3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 CITED1Q99966 193 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 C19orf43Q9BQ61 176 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 BPIFA3Q9BQP9 254 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 TUBGCP2Q9BSJ2 902 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 TMEM121Q9BTD3 319 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 HOXD1Q9GZZ0 328 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 GLT8D2Q9H1C3 349 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 EHD1Q9H4M9 534 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 TMEM185BQ9H7F4 350 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 NMUR1Q9HB89 426 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 POLE4Q9NR33 117 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 TAAR2Q9P1P5 351 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 CYTH4Q9UIA0 394 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 MEMO1Q9Y316 297 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 EXOSC1Q9Y3B2 195 aaKnown RBP3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 MRPS18CQ9Y3D5 142 aaKnown RBP3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 ADAMTS12P58397 1594 aa3.03□□□□□ -1.92
AMBRA1-208ENST00000529558 GRIN2AQ12879 1464 aa3.03□□□□□ -1.93
AMBRA1-208ENST00000529558 MAGI1Q96QZ7 1491 aaPredicted RBP3.03□□□□□ -1.93
AMBRA1-208ENST00000529558 FRMPD4Q14CM0 1322 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 IQCMA0A1B0GVH7 501 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 LRP5LA4QPB2 252 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 M0QX08 132 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 KCNAB3O43448 404 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 EFNA2O43921 213 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 DFNA5O60443 496 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 SRPX2O60687 465 aaPredicted RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 N4BP1O75113 896 aaKnown RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 DUSP11O75319 330 aaKnown RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 CEACAM4O75871 244 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 AP2A2O94973 939 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 CST1P01037 141 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 HOXB7P09629 217 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 H2BFMP0C1H6 154 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 HSMCR30P0CW71 290 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 MMP11P24347 488 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 MARK3P27448 753 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 CD38P28907 300 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 EPS15P42566 896 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 SLC1A4P43007 532 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 BDKRB1P46663 353 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 CRYBA2P53672 197 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 HAND2P61296 217 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 RPS27AP62979 156 aaKnown RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 GUCY2DQ02846 1103 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 BST2Q10589 180 aaKnown RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 ILF3Q12906 894 aaKnown RBP eCLIP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 MAB21L1Q13394 359 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 DOC2AQ14183 400 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 GCKRQ14397 625 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 EMC2Q15006 297 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 CD226Q15762 336 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 ACCSLQ4AC99 568 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 GTDC1Q4AE62 458 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 TMEM52BQ4KMG9 183 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 UNC50Q53HI1 259 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 XKR7Q5GH72 579 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 AADACL4Q5VUY2 407 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 LIPNQ5VXI9 398 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 RAET1LQ5VY80 246 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 PRR5LQ6MZQ0 368 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 RNASEKQ6P5S7 137 aaKnown RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 CHMP1BQ7LBR1 199 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 HSD11B1LQ7Z5J1 315 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 PTAR1Q7Z6K3 402 aaPredicted RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 DHDDSQ86SQ9 333 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 MOB3BQ86TA1 216 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 LUZP2Q86TE4 346 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 SPATA2LQ8IUW3 424 aaPredicted RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 CIARTQ8N365 385 aaPredicted RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 PDCL2Q8N4E4 241 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 STPG4Q8N801 248 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 Q8N9G6 341 aaPredicted RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 MFSD9Q8NBP5 474 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 BPIFCQ8NFQ6 507 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 OR4C5Q8NGB2 326 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 OR10A7Q8NGE5 316 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 FAM81AQ8TBF8 368 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 MAPK15Q8TD08 544 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 SMAP2Q8WU79 429 aaPredicted RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 PCNPQ8WW12 178 aaKnown RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 TM9SF4Q92544 642 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 BADQ92934 168 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 CD101Q93033 1021 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 C10orf35Q96D05 121 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 HAVCR1Q96D42 359 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 C11orf24Q96F05 449 aaPredicted RBP3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 MTMR9Q96QG7 549 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 PANX1Q96RD7 426 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 COPS8Q99627 209 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 SLC6A7Q99884 636 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 FUCA2Q9BTY2 467 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 TSSK1BQ9BXA7 367 aa3.02□□□□□ -1.93
AMBRA1-208ENST00000529558 C1QTNF4Q9BXJ3 329 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms