RNA–Protein interactions for RNA: ENST00000528978.5

AP003557.1-202, humanhuman

TSL 4 BASIC

Gene AP003557.1, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003557.1-202ENST00000528978 PRAF2O60831 178 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 NME6O75414 186 aaPredicted RBP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 PALMO75781 387 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 FGF3P11487 239 aaPredicted RBP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 IRF2P14316 349 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 EPORP19235 508 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 DUSP3P51452 185 aaPredicted RBP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 PDX1P52945 283 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 ART1P52961 327 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 NME5P56597 212 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 SLC25A11Q02978 314 aaKnown RBP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 FOLH1Q04609 750 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 IL10RBQ08334 325 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 KLHL30Q0D2K2 578 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 ILF2Q12905 390 aaKnown RBP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 SF3B4Q15427 424 aaKnown RBP eCLIP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 KLHL40Q2TBA0 621 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 HFEQ30201 348 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 DEFB133Q30KQ1 61 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 FILIP1LQ4L180 1135 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 AARDQ4LEZ3 155 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 GUSBP11Q6P575 273 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 BTNL8Q6UX41 500 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 PIGWQ7Z7B1 504 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 VPS36Q86VN1 386 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 PEX5LQ8IYB4 626 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 NIPA2Q8N8Q9 360 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 LMX1AQ8TE12 382 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 SGF29Q96ES7 293 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 LINGO1Q96FE5 620 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 FAM71F1Q96KD3 344 aaPredicted RBP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 NSMCE3Q96MG7 304 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 ZNF578Q96N58 590 aaPredicted RBP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 ZNF599Q96NL3 588 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 PSKH2Q96QS6 385 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 ATG101Q9BSB4 218 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 SPXQ9BT56 116 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 WRAP53Q9BUR4 548 aaKnown RBP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 DHX35Q9H5Z1 703 aaKnown RBP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 ATP13A3Q9H7F0 1226 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 RNPEPL1Q9HAU8 725 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 MRPL47Q9HD33 250 aaKnown RBP4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 GSN-AS1Q9NRJ2 163 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 SPHK1Q9NYA1 384 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 SPASTQ9UBP0 616 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 PCSK1NQ9UHG2 260 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 TMED3Q9Y3Q3 217 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 PCNX2A6NKB5 2137 aa4.45□□□□□ -1.7
AP003557.1-202ENST00000528978 ANKRD11Q6UB99 2663 aaPredicted RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 DFFAO00273 331 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 NTN3O00634 580 aaPredicted RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 RRP8O43159 456 aaKnown RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 SOCS5O75159 536 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 CSO75390 466 aaKnown RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 GLCEO94923 617 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 PCCBP05166 539 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 HOXC4P09017 264 aaPredicted RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 ALPIP09923 528 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 SKILP12757 684 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 IL4RP24394 825 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 TRIM23P36406 574 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 HSPA9P38646 679 aaKnown RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 MNDAP41218 407 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 ERVPABLB-1P60509 514 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 AP1S1P61966 158 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 RPS18P62269 152 aaKnown RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 RPL24P83731 157 aaKnown RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 SEMG2Q02383 582 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 BCL2L1Q07817 233 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 ZNF415Q09FC8 603 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 SLC10A7Q0GE19 358 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 PIGHQ14442 188 aaPredicted RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 CDKN3Q16667 212 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 ISXQ2M1V0 245 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 KLHL22Q53GT1 634 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 BOLA3Q53S33 107 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 KCTD16Q68DU8 428 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 IL17RELQ6ZVW7 336 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 EFL1Q7Z2Z2 1120 aaKnown RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 PIWIL4Q7Z3Z4 852 aaKnown RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 MMD2Q8IY49 270 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 MUC20Q8N307 709 aaPredicted RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 ZNF441Q8N8Z8 693 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 MAPK15Q8TD08 544 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 FGF11Q92914 225 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 NAT6Q93015 286 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 RTP4Q96DX8 246 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 PDXPQ96GD0 296 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 CSPG4P5Q96PW8 444 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 TMEM237Q96Q45 408 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 IL12RB2Q99665 862 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 CCDC3Q9BQI4 270 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 APOOQ9BUR5 198 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 C1QTNF4Q9BXJ3 329 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 PRRG4Q9BZD6 226 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 THAP2Q9H0W7 228 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 PRORYQ9H606 182 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 DDX31Q9H8H2 851 aaKnown RBP4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 FKRPQ9H9S5 495 aa4.44□□□□□ -1.7
AP003557.1-202ENST00000528978 ASCL3Q9NQ33 180 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms