RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 NME6O75414 186 aaPredicted RBP10.98□□□□□ -0.65
USF1-208ENST00000528768 CLPXO76031 633 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 EML2O95834 649 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 GASTP01350 101 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 THEGLP0DJG4 465 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 C8orf89P0DMQ9 161 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 SMIM10L1P0DMW3 83 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 PORP16435 677 aaPredicted RBP10.98□□□□□ -0.65
USF1-208ENST00000528768 POU1F1P28069 291 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 ALDH4A1P30038 563 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 PRKAR1BP31321 381 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 XKP51811 444 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 LIM2P55344 173 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 SNRPGP62308 76 aaKnown RBP10.98□□□□□ -0.65
USF1-208ENST00000528768 LARS2Q15031 903 aaKnown RBP10.98□□□□□ -0.65
USF1-208ENST00000528768 TRAM2Q15035 370 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 PTGES3Q15185 160 aaKnown RBP10.98□□□□□ -0.65
USF1-208ENST00000528768 GPR19Q15760 415 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 ZNF829Q3KNS6 432 aaPredicted RBP10.98□□□□□ -0.65
USF1-208ENST00000528768 EIPR1Q53HC9 387 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 ZNF311Q5JNZ3 666 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 MEDAGQ5VYS4 303 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 CDC73Q6P1J9 531 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 ZCCHC12Q6PEW1 402 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 KLHL17Q6TDP4 642 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 CD300LDQ6UXZ3 194 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 USP53Q70EK8 1073 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 PEX5LQ8IYB4 626 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 EXD3Q8N9H8 876 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 KCT2Q8NC54 265 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 OR13H1Q8NG92 308 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 OR5D16Q8NGK9 328 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 OR9A2Q8NGT5 310 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 CCL4L1Q8NHW4 92 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 S100ZQ8WXG8 99 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 TANKQ92844 425 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 PMM1Q92871 262 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 YIPF6Q96EC8 236 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 SMIM10Q96HG1 83 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 ZNF681Q96N22 645 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 MACROD1Q9BQ69 325 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 DUSP23Q9BVJ7 150 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 POLR2J2Q9GZM3 115 aaKnown RBP10.98□□□□□ -0.65
USF1-208ENST00000528768 SERHL2Q9H4I8 314 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 ARMC7Q9H6L4 198 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 RLIMQ9NVW2 624 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 HRASLS2Q9NWW9 162 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 NTMQ9P121 344 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 RHCGQ9UBD6 479 aa10.98□□□□□ -0.65
USF1-208ENST00000528768 ATXN7L1Q9ULK2 861 aaPredicted RBP10.98□□□□□ -0.65
USF1-208ENST00000528768 TRBV4-1A0A0J9YWV2 114 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 SPTY2D1-AS1A0A0U1RR47 76 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 SH3PXD2BA1X283 911 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 BLACEA4D250 179 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 CDRT15L2A8MXV6 281 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 H3BN98 237 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 AP3D1O14617 1153 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 BCAS1O75363 584 aaPredicted RBP10.97□□□□□ -0.65
USF1-208ENST00000528768 AK1P00568 194 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 CCNYL3P0C7X3 344 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 PIPP12273 146 aaPredicted RBP10.97□□□□□ -0.65
USF1-208ENST00000528768 POU2F1P14859 743 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 CHMP24386 653 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 EPHA2P29317 976 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 MC3RP41968 323 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 MAP2K4P45985 399 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 CLK1P49759 484 aaKnown RBP10.97□□□□□ -0.65
USF1-208ENST00000528768 TAS2R41P59536 307 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 UBE2IP63279 158 aaKnown RBP10.97□□□□□ -0.65
USF1-208ENST00000528768 TUBA1BP68363 451 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 ST3GAL3Q11203 375 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 TCEA2Q15560 299 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 MAPK11Q15759 364 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 ISXQ2M1V0 245 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 TIMM50Q3ZCQ8 353 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 TPRG1LQ5T0D9 272 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 SLX4IPQ5VYV7 408 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 FCRL6Q6DN72 434 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 ZNF770Q6IQ21 691 aaPredicted RBP10.97□□□□□ -0.65
USF1-208ENST00000528768 TUBA1AQ71U36 451 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 RNF44Q7L0R7 432 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 ZNF367Q7RTV3 350 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 ADCK1Q86TW2 530 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 TRIM73Q86UV7 250 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 CCDC71Q8IV32 467 aaPredicted RBP10.97□□□□□ -0.65
USF1-208ENST00000528768 FLVCR1-AS1Q8TAF5 88 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 ZCCHC10Q8TBK6 192 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 TBC1D15Q8TC07 691 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 GNPDA2Q8TDQ7 276 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 APH1BQ8WW43 257 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 SGCDQ92629 289 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 GGHQ92820 318 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 UCN3Q969E3 161 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 YIPF4Q9BSR8 244 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 NAA50Q9GZZ1 169 aaKnown RBP10.97□□□□□ -0.65
USF1-208ENST00000528768 MTHFD2LQ9H903 347 aaPredicted RBP10.97□□□□□ -0.65
USF1-208ENST00000528768 FKBP14Q9NWM8 211 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 ZNF226Q9NYT6 803 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 NLGN3Q9NZ94 848 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 PILRAQ9UKJ1 303 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms