RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 LRRC61Q9BV99 259 aa14.12□□□□□ -0.15
USP47-207ENST00000527733 ANKRA2Q9H9E1 313 aa14.12□□□□□ -0.15
USP47-207ENST00000527733 FANCFQ9NPI8 374 aa14.12□□□□□ -0.15
USP47-207ENST00000527733 PTPRFP10586 1907 aa14.12□□□□□ -0.15
USP47-207ENST00000527733 ZNF236Q9UL36 1845 aa14.12□□□□□ -0.15
USP47-207ENST00000527733 A0A1B0GTL3 188 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 H3BSA7 217 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 KHDRBS3O75525 346 aaKnown RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 HOXC4P09017 264 aaPredicted RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 MYF6P23409 242 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 CD1CP29017 333 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 RORCP51449 518 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 HOXC5Q00444 222 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 RASGEF1BQ0VAM2 473 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 HIST1H2AAQ96QV6 131 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 SECISBP2Q96T21 854 aaKnown RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 OR10A5Q9H207 317 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 DCSTAMPQ9H295 470 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 PRDM9Q9NQV7 894 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 PADI1Q9ULC6 663 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 ZNF443Q9Y2A4 671 aaPredicted RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 GREM1O60565 184 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 NDUFB2O95178 105 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 HLCSP50747 726 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 TBC1D25Q3MII6 688 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 YOD1Q5VVQ6 348 aaPredicted RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 ULK3Q6PHR2 472 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 KRT74Q7RTS7 529 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 UBQLNLQ8IYU4 475 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 HS3ST5Q8IZT8 346 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 FBXL6Q8N531 539 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 ADAMTS16Q8TE57 1224 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 C11orf24Q96F05 449 aaPredicted RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 IER2Q9BTL4 223 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 SRA1Q9HD15 236 aaKnown RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 TMEM9Q9P0T7 183 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 GMPR2Q9P2T1 348 aaKnown RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 ABCD2Q9UBJ2 740 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 SLC22A7Q9Y694 548 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 RNF215Q9Y6U7 377 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 IGHV1OR15-9A0A0B4J2B8 117 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 CDC14CA4D256 554 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 OR2T1O43869 369 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 TMPRSS11DO60235 418 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 PRKAR1AP10644 381 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 EIF1AXP47813 144 aaKnown RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 ACTC1P68032 377 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 ACTA1P68133 377 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 EEF1A2Q05639 463 aaKnown RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 SMAD2Q15796 467 aaKnown RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 LRIF1Q5T3J3 769 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 KCTD18Q6PI47 426 aaPredicted RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 PTRH1Q86Y79 214 aaKnown RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 CLEC1AQ8NC01 280 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 COX14Q96I36 57 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 CNIH4Q9P003 139 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 ATXN7L1Q9ULK2 861 aaPredicted RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 MICAL3Q7RTP6 2002 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 A0A1W2PR48 441 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 SH3PXD2BA1X283 911 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 CLDN25C9JDP6 229 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 GAPDHSO14556 408 aaPredicted RBP14.11□□□□□ -0.15
USP47-207ENST00000527733 GM2AP17900 193 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 ATG14Q6ZNE5 492 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 DPH1Q9BZG8 443 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 TMEM14AQ9Y6G1 99 aa14.11□□□□□ -0.15
USP47-207ENST00000527733 LILRA5A6NI73 299 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 SAGE2PA6NJ88 616 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 ZNF879B4DU55 563 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 ACOX3O15254 700 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 FARS2O95363 451 aaKnown RBP14.1□□□□□ -0.15
USP47-207ENST00000527733 HTR1AP08908 422 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 MRPL3P09001 348 aaKnown RBP14.1□□□□□ -0.15
USP47-207ENST00000527733 ICAM2P13598 275 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 ZNF20P17024 532 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 OR12D2P58182 307 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 RHAGQ02094 409 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 ZNF750Q32MQ0 723 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 PAPD4Q6PIY7 484 aaKnown RBP14.1□□□□□ -0.15
USP47-207ENST00000527733 DLEU7Q6UYE1 221 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 PEG10Q86TG7 708 aaKnown RBP14.1□□□□□ -0.15
USP47-207ENST00000527733 OR5T3Q8NGG3 340 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 DDIT4LQ96D03 193 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 COQ8BQ96D53 544 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 SLC46A1Q96NT5 459 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 TRPV5Q9NQA5 729 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 ABCG2Q9UNQ0 655 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 RNF6Q9Y252 685 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 PCDHGB5Q9Y5G0 923 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 EPOPA6NHQ4 379 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 ACOT7O00154 380 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 APOL3O95236 402 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 IL33O95760 270 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 IGHEP01854 428 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 CSF2P04141 144 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 CNPY1Q3B7I2 92 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 NKAIN1Q4KMZ8 207 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 KLHL17Q6TDP4 642 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 SLITRK4Q8IW52 837 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 OR14L1PQ8NHC6 308 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms