RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 PNPLA2Q96AD5 504 aa9.87□□□□□ -0.83
NEDD8-205ENST00000527046 ZNF524Q96C55 264 aa9.87□□□□□ -0.83
NEDD8-205ENST00000527046 ZNF583Q96ND8 569 aa9.87□□□□□ -0.83
NEDD8-205ENST00000527046 COL21A1Q96P44 957 aa9.87□□□□□ -0.83
NEDD8-205ENST00000527046 SECISBP2Q96T21 854 aaKnown RBP9.87□□□□□ -0.83
NEDD8-205ENST00000527046 ZNF350Q9GZX5 532 aa9.87□□□□□ -0.83
NEDD8-205ENST00000527046 SLC38A1Q9H2H9 487 aa9.87□□□□□ -0.83
NEDD8-205ENST00000527046 HPF1Q9NWY4 346 aa9.87□□□□□ -0.83
NEDD8-205ENST00000527046 LUZP4Q9P127 313 aa9.87□□□□□ -0.83
NEDD8-205ENST00000527046 CHST2Q9Y4C5 530 aa9.87□□□□□ -0.83
NEDD8-205ENST00000527046 NPIPA5A0A0B4J1W7 369 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 TRAV17A0A0B4J275 112 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 LRRC3CA6NJW4 275 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 DUXAA6NLW8 204 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 NPIPA7E9PJI5 369 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 AIM2O14862 343 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 PEX1O43933 1283 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 TRIM3O75382 744 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-205ENST00000527046 GLSO94925 669 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-205ENST00000527046 SOX30O94993 753 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 UTS2O95399 124 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 RFPL3SP0C7P2 107 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 NPIPA8P0DM63 369 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 MAGEA8P43361 318 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 CPA2P48052 419 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 DNASE1L1P49184 302 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 NRG3P56975 720 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 GPR85P60893 370 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 CBX1P83916 185 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 PMP22Q01453 160 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 CHRNEQ04844 493 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 KLRB1Q12918 225 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 MAPRE2Q15555 327 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 ZNHIT3Q15649 155 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-205ENST00000527046 DECR1Q16698 335 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 KLHL26Q53HC5 615 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 PRAMEF20Q5VT98 475 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 HACD2Q6Y1H2 254 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 DND1Q8IYX4 353 aaKnown RBP9.86□□□□□ -0.83
NEDD8-205ENST00000527046 FBXW8Q8N3Y1 598 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 COX18Q8N8Q8 333 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 WDSUB1Q8N9V3 476 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 ZFP62Q8NB50 900 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-205ENST00000527046 POGLUT1Q8NBL1 392 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 OR2M7Q8NG81 312 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 JADE3Q92613 823 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 MAL2Q969L2 176 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 TMEM125Q96AQ2 219 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 ROPN1LQ96C74 230 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 EFCAB1Q9HAE3 211 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 GALNT9Q9HCQ5 603 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 KLHL1Q9NR64 748 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 TUBA8Q9NY65 449 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-205ENST00000527046 TAGLN3Q9UI15 199 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 MKLN1Q9UL63 735 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 OR10H1Q9Y4A9 318 aa9.86□□□□□ -0.83
NEDD8-205ENST00000527046 TLN1Q9Y490 2541 aaKnown RBP9.86□□□□□ -0.83
NEDD8-205ENST00000527046 DSPPQ9NZW4 1301 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 TMEM229AB2RXF0 380 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 NME4O00746 187 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 SUV39H1O43463 412 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 OIP5O43482 229 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 BCAS1O75363 584 aaPredicted RBP9.85□□□□□ -0.83
NEDD8-205ENST00000527046 UGT2B17O75795 530 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 H6PDO95479 791 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 OXSR1O95747 527 aaPredicted RBP9.85□□□□□ -0.83
NEDD8-205ENST00000527046 NGFRP08138 427 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 KRT16P08779 473 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 TBXA2RP21731 343 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 RPS4Y1P22090 263 aaKnown RBP9.85□□□□□ -0.83
NEDD8-205ENST00000527046 MST1P26927 711 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 CRATP43155 626 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 KHKP50053 298 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 CRYBA2P53672 197 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 DSTNP60981 165 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 PSPHP78330 225 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 FADDQ13158 208 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 ZNF141Q15928 474 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 HYAL4Q2M3T9 481 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 PRR30Q53SZ7 412 aaPredicted RBP9.85□□□□□ -0.83
NEDD8-205ENST00000527046 LRRC74BQ6ZQY2 392 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 TRPM8Q7Z2W7 1104 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 MTERF4Q7Z6M4 381 aaKnown RBP9.85□□□□□ -0.83
NEDD8-205ENST00000527046 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.85□□□□□ -0.83
NEDD8-205ENST00000527046 HMGN2P46Q86SG4 172 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 MARCH3Q86UD3 253 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 SIAH3Q8IW03 269 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 ZZZ3Q8IYH5 903 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 ZNF843Q8N446 348 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 FAM13CQ8NE31 585 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 OR8J3Q8NGG0 315 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 TM9SF4Q92544 642 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 CMTM5Q96DZ9 223 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 NSL1Q96IY1 281 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 TRNT1Q96Q11 434 aaKnown RBP9.85□□□□□ -0.83
NEDD8-205ENST00000527046 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.85□□□□□ -0.83
NEDD8-205ENST00000527046 QRSL1Q9H0R6 528 aaKnown RBP9.85□□□□□ -0.83
NEDD8-205ENST00000527046 TMEM38AQ9H6F2 299 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 A4GALTQ9NPC4 353 aa9.85□□□□□ -0.83
NEDD8-205ENST00000527046 TIMMDC1Q9NPL8 285 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms