RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 KCNK6Q9Y257 313 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 KNSTRNQ9Y448 316 aa1.17□□□□□ -2.22
ECHDC1-219ENST00000526299 KAT6BQ8WYB5 2073 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 IGLV2-18A0A075B6J9 118 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 TRBV2A0A0J9YWF9 115 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 A0A1W2PRV1 198 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 EI24O14681 340 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 ST8SIA3O43173 380 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 ZBTB14O43829 449 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 SSX5O60225 188 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 RANBP6O60518 1105 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 FMO6PO60774 539 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 GOSR1O95249 250 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 CCDC192P0DO97 292 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 ARF4P18085 180 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 RCC1P18754 421 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 NF2P35240 595 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 UGT1A5P35504 534 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 RPS9P46781 194 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 CCR6P51684 374 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 GEMP55040 296 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 KIAA1024LP59773 190 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 SSTP61278 116 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 RPS4XP62701 263 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 HSPA14Q0VDF9 509 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 FUT7Q11130 342 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 NPRL3Q12980 569 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 RPA4Q13156 261 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 NME3Q13232 169 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 UNC119Q13432 240 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 B3GLCTQ6Y288 498 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 MIER3Q7Z3K6 550 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 GLRX5Q86SX6 157 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 TMEM126BQ8IUX1 230 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 ZNF695Q8IW36 515 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 BATF2Q8N1L9 274 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 CHCHD4Q8N4Q1 142 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 COLGALT1Q8NBJ5 622 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 UXS1Q8NBZ7 420 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 ANKRD20A12PQ8NF67 263 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 OR52J3Q8NH60 311 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 SLC22A8Q8TCC7 542 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 MGARPQ8TDB4 240 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 TAF4BQ92750 862 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 COG3Q96JB2 828 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 PKNOX2Q96KN3 472 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 CXorf58Q96LI9 332 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 PANX3Q96QZ0 392 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 ACAT2Q9BWD1 397 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 CACNG6Q9BXT2 260 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 TEX13AQ9BXU3 409 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 DDX47Q9H0S4 455 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 MID1IP1Q9NPA3 183 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 EXOSC3Q9NQT5 275 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 MIS18AQ9NYP9 233 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 CD274Q9NZQ7 290 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 AKAP7Q9P0M2 348 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 HOOK1Q9UJC3 728 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 ODF2LQ9ULJ1 636 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 SNX5Q9Y5X3 404 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 ANKRD30BQ9BXX2 1392 aa1.16□□□□□ -2.22
ECHDC1-219ENST00000526299 THSD7BQ9C0I4 1608 aa1.15□□□□□ -2.22
ECHDC1-219ENST00000526299 A0A087X0K7 114 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 NPIPA5A0A0B4J1W7 369 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 RNF103-CHMP3A0A140T963 221 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 SYCE3A1L190 88 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 ARHGAP42A6NI28 874 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 NPIPA5E9PKD4 350 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CHEK1O14757 476 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 ARPC1BO15143 372 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CFLARO15519 480 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 RIPK2O43353 540 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 KERAO60938 352 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 INSP01308 110 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 HOXB7P09629 217 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 TPBGLP0DKB5 382 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CT45A8P0DMV1 189 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CT45A9P0DMV2 189 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 IGFBP3P17936 291 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 VCLP18206 1134 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 TNNT2P45379 298 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CSNK1DP48730 415 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CCZ1BP86790 482 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CCZ1P86791 482 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 MADCAM1Q13477 382 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 SMC1AQ14683 1233 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CAMK4Q16566 473 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 HAGHQ16775 308 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CCDC40Q4G0X9 1142 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 AARDQ4LEZ3 155 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CT45A2Q5DJT8 189 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 LGSNQ5TDP6 509 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 KCTD11Q693B1 232 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CWC27Q6UX04 472 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 OLFM4Q6UX06 510 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 PPP1R27Q86WC6 154 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 AQP12AQ8IXF9 295 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 PEX5LQ8IYB4 626 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CNPY4Q8N129 248 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 FAM71E2Q8N5Q1 922 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms