RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 N4BP1O75113 896 aaKnown RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 GMNNO75496 209 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 HPRP00739 348 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 ASS1P00966 412 aaKnown RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 CCDC192P0DO97 292 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 NEFHP12036 1026 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 CD1DP15813 335 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 HOXB8P17481 243 aaPredicted RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 ATF6P18850 670 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 WARSP23381 471 aaKnown RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 HOXA9P31269 272 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 GTF2H1P32780 548 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 TNNC1P63316 161 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 NOP14P78316 857 aaKnown RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 FCHO2Q0JRZ9 810 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 NFATC2Q13469 925 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 STX1AQ16623 288 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 TYSND1Q2T9J0 566 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 KLHL40Q2TBA0 621 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 FUT11Q495W5 492 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 SLC39A12Q504Y0 691 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 HSP90B2PQ58FF3 399 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 HSP90AA4PQ58FG1 418 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 ZNF789Q5FWF6 425 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 PPM1LQ5SGD2 360 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 TPGS2Q68CL5 300 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 ZNF770Q6IQ21 691 aaPredicted RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 IYDQ6PHW0 289 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 SASS6Q6UVJ0 657 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 SCARA5Q6ZMJ2 495 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 C3P1Q6ZMU1 363 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 UNC45BQ8IWX7 931 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 TMEM86AQ8N2M4 240 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 FBXL13Q8NEE6 735 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 PSMA8Q8TAA3 256 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 ZNF461Q8TAF7 563 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 FIBINQ8TAL6 211 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 C11orf45Q8TAV5 145 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 SPATA18Q8TC71 538 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 TAF4BQ92750 862 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 MYLPFQ96A32 169 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 SYAP1Q96A49 352 aaPredicted RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 CNOT6LQ96LI5 555 aaKnown RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 PRICKLE1Q96MT3 831 aaPredicted RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 ANKRD27Q96NW4 1050 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 PKMYT1Q99640 499 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 PKP2Q99959 881 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 RBM4BQ9BQ04 359 aaKnown RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 SLC5A7Q9GZV3 580 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 POMKQ9H5K3 350 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 RNPEPL1Q9HAU8 725 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 S100A14Q9HCY8 104 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 ZNF319Q9P2F9 582 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 HMGXB4Q9UGU5 601 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 LIPT1Q9Y234 373 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 ETV7Q9Y603 341 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 AUP1Q9Y679 476 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 PRRC2BQ5JSZ5 2229 aaKnown RBP3.21□□□□□ -1.9
CD44-219ENST00000525685 PATJQ8NI35 1801 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 PTPRDP23468 1912 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 CHD7Q9P2D1 2997 aa3.21□□□□□ -1.9
CD44-219ENST00000525685 CLUHO75153 1309 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 OBSL1O75147 1896 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 RANBP2P49792 3224 aaKnown RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 MYBPHLA2RUH7 354 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 SOCS3O14543 225 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 TRAFD1O14545 582 aaPredicted RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 PRRG1O14668 218 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 TNFSF12O43508 249 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 FGFR1OPO95684 399 aaKnown RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 GNA14O95837 355 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 KRT5P13647 590 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 ACKR3P25106 362 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 LMO2P25791 158 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 MTIF2P46199 727 aaKnown RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 NDST1P52848 882 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 NDST2P52849 883 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 NME5P56597 212 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 NTHL1P78549 312 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 RBBP4Q09028 425 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 INCA1Q0VD86 236 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 TWF1Q12792 350 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 LCP2Q13094 533 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 PLD1Q13393 1074 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 ENPP2Q13822 863 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 C3AR1Q16581 482 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 TPD52L1Q16890 204 aaPredicted RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 ECSCRQ19T08 205 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 ZNF674Q2M3X9 581 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 RFTN2Q52LD8 501 aaPredicted RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 C1QTNF12Q5T7M4 302 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 AGAP6Q5VW22 663 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 ZNF776Q68DI1 518 aaPredicted RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 PAQR6Q6TCH4 344 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 GTSCR1Q86UQ5 136 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 FAM131BQ86XD5 332 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 RNF130Q86XS8 419 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 TMEM126BQ8IUX1 230 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms