RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CDC14AQ9UNH5 594 aa2.73□□□□□ -1.97
CSDE1-209ENST00000525132 HS3ST2Q9Y278 367 aa2.73□□□□□ -1.97
CSDE1-209ENST00000525132 ZNF510Q9Y2H8 683 aa2.73□□□□□ -1.97
CSDE1-209ENST00000525132 MRPL11Q9Y3B7 192 aaKnown RBP2.73□□□□□ -1.97
CSDE1-209ENST00000525132 GRIP1Q9Y3R0 1128 aa2.73□□□□□ -1.97
CSDE1-209ENST00000525132 SNX9Q9Y5X1 595 aa2.73□□□□□ -1.97
CSDE1-209ENST00000525132 BAZ2AQ9UIF9 1905 aaKnown RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 A0A087WZY1 265 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 OR2M5A3KFT3 312 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 CTAGE9A4FU28 777 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 F8WDY8 70 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 H0YIG0 161 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 MID1O15344 667 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 CLDN3O15551 220 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 HSPA12AO43301 675 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 GMFGO60234 142 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 CACNG3O60359 315 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 OR10H2O60403 315 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 KLHL41O60662 606 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 TSC22D2O75157 780 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 DEDDO75618 318 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 TOP1P11387 765 aaKnown RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 CPA3P15088 417 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 ZNF18P17022 549 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 PSMA5P28066 241 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 CD1CP29017 333 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 STX2P32856 288 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 IER3P46695 156 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 SLC6A12P48065 614 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 MMP15P51511 669 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 CTSCP53634 463 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 LINC00205P59089 165 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 TAS2R38P59533 333 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 PDZK1IP1Q13113 114 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 RBMS2Q15434 407 aaKnown RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 MCMDC2Q4G0Z9 681 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 PIK3CD-AS1Q5SR53 167 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 C6orf10Q5SRN2 563 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 CCNYL2Q5T2Q4 361 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 GCNT6Q5T4J0 391 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 ZNF776Q68DI1 518 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 KCTD18Q6PI47 426 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 BTNL8Q6UX41 500 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 ZNF367Q7RTV3 350 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 NT5DC3Q86UY8 548 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 PARGQ86W56 976 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 ZC3HC1Q86WB0 502 aaKnown RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 COMMD2Q86X83 199 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 CHERPQ8IWX8 916 aaKnown RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 C1orf87Q8N0U7 546 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 PCDH20Q8N6Y1 951 aaKnown RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 OR4D9Q8NGE8 314 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 MPLKIPQ8TAP9 179 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 SSMEM1Q8WWF3 244 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 CTNNBL1Q8WYA6 563 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 SMPDL3BQ92485 455 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 PROX1Q92786 737 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 MTERF3Q96E29 417 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 CPB2Q96IY4 423 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 XPO6Q96QU8 1125 aaKnown RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 C17orf62Q9BQA9 187 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 LRRC61Q9BV99 259 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 TPPP3Q9BW30 176 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 SLC2A11Q9BYW1 496 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 TM6SF1Q9BZW5 370 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 TSPYL1Q9H0U9 437 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 FOXP1Q9H334 677 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 KLHL31Q9H511 634 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 SLA2Q9H6Q3 261 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 VPS37BQ9H9H4 285 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 Q9N2K0 584 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 RBM28Q9NW13 759 aaKnown RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 TMEM45AQ9NWC5 275 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 ELOVL5Q9NYP7 299 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 MSRB1Q9NZV6 116 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 FBXL2Q9UKC9 423 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 UBQLN1Q9UMX0 589 aaKnown RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 SNX6Q9UNH7 406 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 KCNJ14Q9UNX9 436 aa2.72□□□□□ -1.97
CSDE1-209ENST00000525132 FOXA2Q9Y261 457 aaPredicted RBP2.72□□□□□ -1.97
CSDE1-209ENST00000525132 MYH10P35580 1976 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 IGKV6D-21A0A0A0MT36 114 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 SPTY2D1-AS1A0A0U1RR47 76 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 A0A1W2PPK0 400 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 J3KR12 359 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 SOCS2O14508 198 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 WNT9BO14905 357 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 ATP6V1G1O75348 118 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 GMNNO75496 209 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 ADCY5O95622 1261 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 MOCS2O96007 188 aaPredicted RBP2.71□□□□□ -1.98
CSDE1-209ENST00000525132 PCCBP05166 539 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 CHRNB2P17787 502 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 AKT2P31751 481 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 TRPC1P48995 793 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 TUFMP49411 452 aaKnown RBP2.71□□□□□ -1.98
CSDE1-209ENST00000525132 NDST2P52849 883 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 HNRNPH2P55795 449 aaKnown RBP2.71□□□□□ -1.98
CSDE1-209ENST00000525132 CLDN20P56880 219 aa2.71□□□□□ -1.98
CSDE1-209ENST00000525132 NUP107P57740 925 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms