RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 AIFM2Q9BRQ8 373 aa9.62□□□□□ -0.87
SPIDR-225ENST00000524141 CACNG6Q9BXT2 260 aa9.62□□□□□ -0.87
SPIDR-225ENST00000524141 PPA2Q9H2U2 334 aa9.62□□□□□ -0.87
SPIDR-225ENST00000524141 DDX31Q9H8H2 851 aaKnown RBP9.62□□□□□ -0.87
SPIDR-225ENST00000524141 LIN7BQ9HAP6 207 aa9.62□□□□□ -0.87
SPIDR-225ENST00000524141 DENND4CQ5VZ89 1909 aa9.62□□□□□ -0.87
SPIDR-225ENST00000524141 COL4A6Q14031 1691 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 FZD7O75084 574 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 TSPAN9O75954 239 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 CH25HO95992 272 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 DRD2P14416 443 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF250P15622 560 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 WEE1P30291 646 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 NTSP30990 170 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 MMP15P51511 669 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 CLCNKAP51800 687 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 TRA2BP62995 288 aaKnown RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 GALEQ14376 348 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 GSG1Q2KHT4 349 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 UAP1L1Q3KQV9 507 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 LGALSLQ3ZCW2 172 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 SLC36A2Q495M3 483 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 PXDC1Q5TGL8 231 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 SLC22A10Q63ZE4 541 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 MEX3DQ86XN8 651 aaKnown RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 PIAS4Q8N2W9 510 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 LMNTD1Q8N9Z9 388 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 OR4Q3Q8NH05 313 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 TRMT10AQ8TBZ6 339 aaKnown RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 SFXN5Q8TD22 340 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 ACOT11Q8WXI4 607 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 HSD17B8Q92506 261 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 DIO2Q92813 273 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 RAD51AP1Q96B01 352 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 AHCYL2Q96HN2 611 aaKnown RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF514Q96K75 400 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 AMDHD1Q96NU7 426 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 FCRL4Q96PJ5 515 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 ABHD1Q96SE0 405 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 PITHD1Q9GZP4 211 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 KIAA1549LQ6ZVL6 1849 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 LOC105369274A0A096LPK9 316 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 C17orf113A0A1B0GUU1 675 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 CIB4A0PJX0 185 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 J3QRE1 110 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 SNAPC5O75971 98 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 UBL3O95164 117 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 TBX6O95947 436 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 H2AFB2P0C5Z0 115 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 NAGAP17050 411 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 ENPP1P22413 925 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 KELP23276 732 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 GIFP27352 417 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 MLLT1Q03111 559 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 CRHR2Q13324 411 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 FZD5Q13467 585 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 SUZ12Q15022 739 aaKnown RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 DECR1Q16698 335 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 IL20RBQ6UXL0 311 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 BAIAP2L2Q6UXY1 529 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 LIPIQ6XZB0 460 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF620Q6ZNG0 422 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 BTN2A1Q7KYR7 527 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 KCTD20Q7Z5Y7 419 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 OR4N4Q8N0Y3 316 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 SLC43A3Q8NBI5 491 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 TOR1AIP2Q8NFQ8 470 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 OR56B4Q8NH76 319 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 RPLP0P6Q8NHW5 317 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 ALG8Q9BVK2 526 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 GSX2Q9BZM3 304 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 TMEM168Q9H0V1 697 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 GLIPR2Q9H4G4 154 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 KRCC1Q9NPI7 259 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-225ENST00000524141 DLL4Q9NR61 685 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 INPP5EQ9NRR6 644 aa9.61□□□□□ -0.87
SPIDR-225ENST00000524141 MYOFQ9NZM1 2061 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 THSD7BQ9C0I4 1608 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 NDUFS4O43181 175 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 SSNA1O43805 119 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 LILRB5O75023 590 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 SERPINI2O75830 405 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 MPC2O95563 127 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 LCN1P31025 176 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 SOX9P48436 509 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 TAS2R43P59537 309 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 RAB8AP61006 207 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 SRP54P61011 504 aaKnown RBP9.6□□□□□ -0.87
SPIDR-225ENST00000524141 PUDPQ08623 228 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF805Q5CZA5 627 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 ZNF311Q5JNZ3 666 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 FAAH2Q6GMR7 532 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 PLEKHM3Q6ZWE6 761 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 CXXC5Q7LFL8 322 aaKnown RBP9.6□□□□□ -0.87
SPIDR-225ENST00000524141 GPAT4Q86UL3 456 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 SIRT6Q8N6T7 355 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 OR6C4Q8NGE1 309 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 OR51G2Q8NGK0 314 aa9.6□□□□□ -0.87
SPIDR-225ENST00000524141 GIMAP1Q8WWP7 306 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms