RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	C1GALT1C1L	P0DN25	315 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	CYP2A6	P11509	494 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	PTBP1	P26599	531 aa	Known RBP eCLIP	7.33	□□□□□ -1.24	4e-17	■■■■■ 34
SPIDR-223	ENST00000524033	MAT2A	P31153	395 aa	Known RBP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	DRD3	P35462	400 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	KCNJ5	P48544	419 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	ARRB1	P49407	418 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	METAP1	P53582	386 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	TBPL1	P62380	186 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	MC1R	Q01726	317 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	SCN1B	Q07699	218 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	CNTN1	Q12860	1018 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	TPBG	Q13641	420 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	EFR3A	Q14156	821 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLBP	Q14493	270 aa	Known RBP eCLIP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	GANAB	Q14697	944 aa	Known RBP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC5A12	Q1EHB4	618 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	POM121L1P	Q3SYA9	428 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	ARMC4	Q5T2S8	1044 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	REEP3	Q6NUK4	255 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	PAQR6	Q6TCH4	344 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	DPY19L3	Q6ZPD9	716 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	TRIL	Q7L0X0	811 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	DPPA4	Q7L190	304 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMPRSS7	Q7RTY8	843 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	TECPR1	Q7Z6L1	1165 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMPRSS11B	Q86T26	416 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	DMRTC2	Q8IXT2	367 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	HORMAD2	Q8N7B1	307 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	RASGEF1A	Q8N9B8	481 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF485	Q8NCK3	441 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	GPR156	Q8NFN8	814 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR7G1	Q8NGA0	311 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR4D11	Q8NGI4	311 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR52I1	Q8NGK6	324 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZFAND1	Q8TCF1	268 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	CREB3L4	Q8TEY5	395 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	ASZ1	Q8WWH4	475 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	NEIL2	Q969S2	332 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	DEPDC7	Q96QD5	511 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMEM246	Q9BRR3	403 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF717	Q9BY31	904 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	ADAM19	Q9H013	955 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	PPP1R3E	Q9H7J1	279 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	MARCH7	Q9H992	704 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	ABCB9	Q9NP78	766 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	EXOSC4	Q9NPD3	245 aa	Known RBP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	PLSCR3	Q9NRY6	295 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	SIRT3	Q9NTG7	399 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	TAAR2	Q9P1P5	351 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	KLHL21	Q9UJP4	597 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	SSR3	Q9UNL2	185 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	EML5	Q05BV3	1969 aa		7.33	□□□□□ -1.24
SPIDR-223	ENST00000524033	ANKRD11	Q6UB99	2663 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033		A0A0G2JMP0	313 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033		A0A1W2PR77	199 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033		A0A1W2PRB8	838 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMEM129	A0AVI4	362 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033		A8MV72	311 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	C10orf142	B7Z368	130 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	C1QTNF3-AMACR	E9PGA6	284 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	WWP2	O00308	870 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	PLD2	O14939	933 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	PLRG1	O43660	514 aa	Known RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	MTX2	O75431	263 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	PDE9A	O76083	593 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	C1orf105	O95561	183 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	LDOC1	O95751	146 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	RAB36	O95755	333 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	H1F0	P07305	194 aa	Known RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	IGFBP1	P08833	259 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	POU2F1	P14859	743 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	EPHA1	P21709	976 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	MYL9	P24844	172 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	AZGP1	P25311	298 aa	Known RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	PSMA1	P25786	263 aa	Known RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	NUDT1	P36639	197 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	KIR2DL3	P43628	341 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC9A3	P48764	834 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	TGM4	P49221	684 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	XK	P51811	444 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	CTSC	P53634	463 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	CLDN20	P56880	219 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	NXPH1	P58417	271 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	GNG2	P59768	71 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	PPP3R1	P63098	170 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	HOXC5	Q00444	222 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	CDK5	Q00535	292 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	C2orf80	Q0P641	193 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	TNK1	Q13470	666 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	SHB	Q15464	509 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	NDUFA9	Q16795	377 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	CYP27C1	Q4G0S4	372 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	ENTPD8	Q5MY95	495 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	LCE2C	Q5TA81	110 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF385C	Q66K41	422 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	TCTN3	Q6NUS6	607 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	BRAT1	Q6PJG6	821 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	METAP1D	Q6UB28	335 aa	Predicted RBP	7.32	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms