RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 MCHR2Q969V1 340 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 DUS2Q9NX74 493 aaKnown RBP2.89□□□□□ -1.95
PCM1-220ENST00000523896 GDAP2Q9NXN4 497 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 ACTR3BQ9P1U1 418 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 EXOSC1Q9Y3B2 195 aaKnown RBP2.89□□□□□ -1.95
PCM1-220ENST00000523896 NAALAD2Q9Y3Q0 740 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.89□□□□□ -1.95
PCM1-220ENST00000523896 CACNA1AO00555 2505 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 LRRC9Q6ZRR7 1453 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 MAGI2Q86UL8 1455 aa2.89□□□□□ -1.95
PCM1-220ENST00000523896 SCAF11Q99590 1463 aaKnown RBP2.89□□□□□ -1.95
PCM1-220ENST00000523896 ZMYM4Q5VZL5 1548 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 NEURL4Q96JN8 1562 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 BICDL2A1A5D9 508 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 H0YL77 283 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 TM9SF1O15321 606 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 RAMP1O60894 148 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 TOM1L1O75674 476 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 PTBP3O95758 552 aaKnown RBP2.88□□□□□ -1.95
PCM1-220ENST00000523896 THY1P04216 161 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 CT45A10P0DMU9 189 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 RRASP10301 218 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 UMPSP11172 480 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 LAMP1P11279 417 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 OR1D4P47884 311 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 PAX2Q02962 417 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 SLC10A1Q14973 349 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 RAB35Q15286 201 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 CYBRD1Q53TN4 286 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 PNCKQ6P2M8 343 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 VITQ6UXI7 678 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 ZSCAN30Q86W11 494 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 GPD1LQ8N335 351 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 KLHL30-AS1Q8NEE0 82 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 ANKRD20A12PQ8NF67 263 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 ADIPOR1Q96A54 375 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 PINX1Q96BK5 328 aaKnown RBP2.88□□□□□ -1.95
PCM1-220ENST00000523896 DNAJA3Q96EY1 480 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 KAT8Q9H7Z6 458 aaKnown RBP2.88□□□□□ -1.95
PCM1-220ENST00000523896 ACTR8Q9H981 624 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 TRPV5Q9NQA5 729 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 PRODH2Q9UF12 536 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 RSPH14Q9UHP6 348 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 FOXJ3Q9UPW0 622 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 COL16A1Q07092 1604 aaPredicted RBP2.88□□□□□ -1.95
PCM1-220ENST00000523896 ABCC4O15439 1325 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 ERICH3Q5RHP9 1530 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 SHANK3Q9BYB0 1731 aa2.88□□□□□ -1.95
PCM1-220ENST00000523896 NPHP4O75161 1426 aaPredicted RBP2.87□□□□□ -1.95
PCM1-220ENST00000523896 CNTLNQ9NXG0 1405 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 HECW1Q76N89 1606 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 ABCA9Q8IUA7 1624 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 EFCAB7A8K855 629 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 SLC17A2O00624 439 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 PHOX2AO14813 284 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 LCMT2O60294 686 aaKnown RBP2.87□□□□□ -1.95
PCM1-220ENST00000523896 TSC22D2O75157 780 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 TRIM16O95361 564 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 APBB3O95704 486 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 ANXA4P09525 319 aaPredicted RBP2.87□□□□□ -1.95
PCM1-220ENST00000523896 MAGEA9P43362 315 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 HTR5AP47898 357 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 ALDH3B2P48448 385 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 FNTAP49354 379 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 DPYSQ14117 519 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 INAQ16352 499 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 CDKN3Q16667 212 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 UTF1Q5T230 341 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 LGSNQ5TDP6 509 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 CGB2Q6NT52 195 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 UNC5DQ6UXZ4 953 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 OR52B4Q8NGK2 314 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 TFB1MQ8WVM0 346 aaKnown RBP2.87□□□□□ -1.95
PCM1-220ENST00000523896 GTSF1Q8WW33 167 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 PPP1R16AQ96I34 528 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 HCAR1Q9BXC0 346 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 OPN3Q9H1Y3 402 aaPredicted RBP2.87□□□□□ -1.95
PCM1-220ENST00000523896 RPAP3Q9H6T3 665 aaPredicted RBP2.87□□□□□ -1.95
PCM1-220ENST00000523896 ECT2Q9H8V3 914 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 VAT1LQ9HCJ6 419 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 EXOSC3Q9NQT5 275 aaKnown RBP2.87□□□□□ -1.95
PCM1-220ENST00000523896 YAE1D1Q9NRH1 226 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 GALPQ9UBC7 116 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 BARX2Q9UMQ3 279 aaPredicted RBP2.87□□□□□ -1.95
PCM1-220ENST00000523896 MGAT4BQ9UQ53 548 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 CCDC88BA6NC98 1476 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 IQGAP1P46940 1657 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 GRIN2DO15399 1336 aa2.87□□□□□ -1.95
PCM1-220ENST00000523896 NCAPD2Q15021 1401 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 WDR90Q96KV7 1748 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 CCT8L1PA6NM43 557 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 ANKRD30BLA7E2S9 258 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 F8WDY8 70 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 G3V3Y1 287 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 H2AFZP0C0S5 128 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 PGAM2P15259 253 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 SDC1P18827 310 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 TSPAN8P19075 237 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 CD86P42081 329 aa2.86□□□□□ -1.95
PCM1-220ENST00000523896 EMDP50402 254 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms