RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TSNAXIP1Q2TAA8 658 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 SAMD14Q8IZD0 417 aaPredicted RBP23.27■■□□□ 1.32
PVT1-219ENST00000523427 C16orf78Q8WTQ4 265 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 C1GALT1C1Q96EU7 318 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 NINJ2Q9NZG7 142 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 EMC9Q9Y3B6 208 aa23.27■■□□□ 1.32
PVT1-219ENST00000523427 RAI1Q7Z5J4 1906 aaPredicted RBP23.26■■□□□ 1.31
PVT1-219ENST00000523427 A8MT66 165 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 EIF1AYO14602 144 aaKnown RBP23.26■■□□□ 1.31
PVT1-219ENST00000523427 PLOD3O60568 738 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 OPN1LWP04000 364 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 JUNP05412 331 aaKnown RBP23.26■■□□□ 1.31
PVT1-219ENST00000523427 MPIP34949 423 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 HSD17B3P37058 310 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 PSPHP78330 225 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 CLCQ05315 142 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 GANABQ14697 944 aaKnown RBP23.26■■□□□ 1.31
PVT1-219ENST00000523427 SH2D5Q6ZV89 423 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 CAVIN3Q969G5 261 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 APIPQ96GX9 242 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 MRPL57Q9BQC6 102 aaKnown RBP23.26■■□□□ 1.31
PVT1-219ENST00000523427 MRPL46Q9H2W6 279 aaKnown RBP23.26■■□□□ 1.31
PVT1-219ENST00000523427 ACSS3Q9H6R3 686 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 LAMP3Q9UQV4 416 aa23.26■■□□□ 1.31
PVT1-219ENST00000523427 PCNX3Q9H6A9 2034 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 RNF223E7ERA6 249 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 SUPT7LO94864 414 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 HMOX2P30519 316 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 CLK3P49761 638 aaKnown RBP23.25■■□□□ 1.31
PVT1-219ENST00000523427 ACSM2AQ08AH3 577 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 VEZF1Q14119 521 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 HEPACAMQ14CZ8 416 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 DECR1Q16698 335 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 ACSM2BQ68CK6 577 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 TMEM107Q6UX40 140 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 CEP112Q8N8E3 955 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 METTL6Q8TCB7 284 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 IGFBPL1Q8WX77 278 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 ZNF701Q9NV72 531 aaPredicted RBP23.25■■□□□ 1.31
PVT1-219ENST00000523427 PYCARDQ9ULZ3 195 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 VDAC3Q9Y277 283 aa23.25■■□□□ 1.31
PVT1-219ENST00000523427 LINC01387J3KSC0 135 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 COQ9O75208 318 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 ULK1O75385 1050 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 FCGR2AP12318 317 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 MAGEA12P43365 314 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 HTR6P50406 440 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 NCBP2P52298 156 aaKnown RBP eCLIP23.24■■□□□ 1.315e-7■■□□□ 13.7
PVT1-219ENST00000523427 CSTF3Q12996 717 aaKnown RBP23.24■■□□□ 1.31
PVT1-219ENST00000523427 GUSBP1Q15486 140 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 PRSS53Q2L4Q9 553 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 STAC2Q6ZMT1 411 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 METTL25Q8N6Q8 603 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 AKAP1Q92667 903 aaKnown RBP eCLIP23.24■■□□□ 1.31
PVT1-219ENST00000523427 ACPTQ9BZG2 426 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 TBL1XR1Q9BZK7 514 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 PLSCR4Q9NRQ2 329 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 AP4B1Q9Y6B7 739 aa23.24■■□□□ 1.31
PVT1-219ENST00000523427 PRR14LQ5THK1 2151 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 POC1B-GALNT4F8VUJ3 575 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 HS3ST1O14792 307 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 SBK3P0C264 359 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 HSD3B1P14060 373 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 PPP3CBP16298 524 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 HSD3B2P26439 372 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 C2orf80Q0P641 193 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 CAPRIN1Q14444 709 aaKnown RBP23.23■■□□□ 1.31
PVT1-219ENST00000523427 CLEC12BQ2HXU8 276 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 CTU2Q2VPK5 515 aaKnown RBP23.23■■□□□ 1.31
PVT1-219ENST00000523427 CYP27C1Q4G0S4 372 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 OR6K3Q8NGY3 331 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 ACTR6Q9GZN1 396 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 FAM120CQ9NX05 1096 aaKnown RBP23.23■■□□□ 1.31
PVT1-219ENST00000523427 ABCG2Q9UNQ0 655 aa23.23■■□□□ 1.31
PVT1-219ENST00000523427 TIA1P31483 386 aaKnown RBP eCLIP23.22■■□□□ 1.31
PVT1-219ENST00000523427 KRTAP1-1Q07627 177 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 DMTNQ08495 405 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 RASA2Q15283 850 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 UNC50Q53HI1 259 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 GPRIN3Q6ZVF9 776 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 GGNQ86UU5 652 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 ZNF611Q8N823 705 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 SLC9A6Q92581 669 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 PAFAH2Q99487 392 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 C12orf49Q9H741 205 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 Q9N2J8 555 aa23.22■■□□□ 1.31
PVT1-219ENST00000523427 RNF212BA8MTL3 300 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 TRIM49D1C9J1S8 452 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 ANGPTL1O95841 491 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 ANXA4P09525 319 aaPredicted RBP23.21■■□□□ 1.31
PVT1-219ENST00000523427 COL6A2P12110 1019 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 PAX1P15863 534 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 SPIN4Q56A73 249 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 SPDYAQ5MJ70 313 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 HMBOX1Q6NT76 420 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 OR10D3Q8NH80 312 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 RAB3IL1Q8TBN0 382 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 GMPPAQ96IJ6 420 aaPredicted RBP23.21■■□□□ 1.31
PVT1-219ENST00000523427 ZDHHC18Q9NUE0 388 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 DDX18Q9NVP1 670 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms