RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 NEIL3Q8TAT5 605 aa12.29□□□□□ -0.44
PCDHGB1-201ENST00000523390 KIAA1143Q96AT1 154 aaPredicted RBP12.29□□□□□ -0.44
PCDHGB1-201ENST00000523390 FOXQ1Q9C009 403 aa12.29□□□□□ -0.44
PCDHGB1-201ENST00000523390 B3GNT4Q9C0J1 378 aa12.29□□□□□ -0.44
PCDHGB1-201ENST00000523390 KIR3DX1Q9H7L2 352 aa12.29□□□□□ -0.44
PCDHGB1-201ENST00000523390 ATXN7L1Q9ULK2 861 aaPredicted RBP12.29□□□□□ -0.44
PCDHGB1-201ENST00000523390 SCN4AP35499 1836 aa12.29□□□□□ -0.44
PCDHGB1-201ENST00000523390 CROCCQ5TZA2 2017 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 NOS1APO75052 506 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 TNFRSF17Q02223 184 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 FAM71E1Q6IPT2 247 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 PODNL1Q6PEZ8 512 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 SNX29P2Q8IUI4 249 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 UBQLNLQ8IYU4 475 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 MMP21Q8N119 569 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 PRRC1Q96M27 445 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 TIGARQ9NQ88 270 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 RPRD1BQ9NQG5 326 aaKnown RBP12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 DHCR7Q9UBM7 475 aaKnown RBP12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 CASP8AP2Q9UKL3 1982 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 ZDBF2Q9HCK1 2354 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 SLC22A31A6NKX4 558 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 PPP1R3DO95685 299 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 MAD2L1BPQ15013 274 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 SMN1Q16637 294 aaKnown RBP12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 ANKDD1AQ495B1 522 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 FRMPD2BQ6IN97 320 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 TMEM184AQ6ZMB5 413 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 PRSS48Q7RTY5 328 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 TMEM239Q8WW34 195 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 MSLNLQ96KJ4 702 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 ABCD2Q9UBJ2 740 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 SRPX2O60687 465 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 CD160O95971 181 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 PSKH1P11801 424 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 PRKCAP17252 672 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 ENDOUP21128 410 aaKnown RBP12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 CTXN1P60606 82 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 GAB1Q13480 694 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 ARHGAP11AQ6P4F7 1023 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 FNDC8Q8TC99 324 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 SLC22A8Q8TCC7 542 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 OR1F2PQ96R84 312 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 C1QTNF2Q9BXJ5 285 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 HDHD5Q9BXW7 423 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 ZNF304Q9HCX3 659 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 A8MVJ9 347 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 KIAA0513O60268 411 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 ALPLP05186 524 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 GPR19Q15760 415 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 ZNF829Q3KNS6 432 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 AGBL4Q5VU57 503 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 RAET1LQ5VY80 246 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 C1orf94Q6P1W5 598 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 EID2Q8N6I1 236 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 TOR1AIP2Q8NFQ8 470 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 SFXN5Q8TD22 340 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 GAB3Q8WWW8 586 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 RSC1A1Q92681 617 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 CUTCQ9NTM9 273 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 ING4Q9UNL4 249 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 ST14Q9Y5Y6 855 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 GVINP1Q7Z2Y8 2422 aa12.28□□□□□ -0.44
PCDHGB1-201ENST00000523390 A0A1W2PPL8 197 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 DCNP07585 359 aaKnown RBP12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 SMIM18P0DKX4 95 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 HOXC12P31275 282 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 TPTEP56180 551 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 TAS2R43P59537 309 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 KIAA1024LP59773 190 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 APOFQ13790 326 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 PLEKHG7Q6ZR37 379 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 UBE2Q1Q7Z7E8 422 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 ANKK1Q8NFD2 765 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 AMDHD1Q96NU7 426 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 SLC30A2Q9BRI3 323 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 ORAI3Q9BRQ5 295 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 OR52A5Q9H2C5 316 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 KLHL31Q9H511 634 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 RNF121Q9H920 327 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 KLF15Q9UIH9 416 aa12.27□□□□□ -0.44
PCDHGB1-201ENST00000523390 FAM172BPA6NC97 362 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 FAM171A2A8MVW0 826 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 GPX2P18283 190 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 GGT2P36268 569 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 OR2B6P58173 313 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 CHAF1BQ13112 559 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 NKAIN2Q5VXU1 208 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 CARD17Q5XLA6 110 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZNF627Q7L945 461 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 FAM217AQ8IXS0 508 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 TMEM185BQ9H7F4 350 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 SRPK3Q9UPE1 567 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 TNFRSF10CO14798 259 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 DNAJB5O75953 348 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 CD1EP15812 388 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 AFF3P51826 1226 aaKnown RBP12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 RPS15P62841 145 aaKnown RBP12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 CBLBQ13191 982 aa12.27□□□□□ -0.45
PCDHGB1-201ENST00000523390 ZFP69Q49AA0 526 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms