RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 PRODH2Q9UF12 536 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 MGAT4BQ9UQ53 548 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 PMF1-BGLAPU3KQ54 211 aa12.24□□□□□ -0.45
NKX3-1-202ENST00000523261 CMYA5Q8N3K9 4069 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 GBAP04062 536 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 ATP1B1P05026 303 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 BMP4P12644 408 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 IL12BP29460 328 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 IL2RGP31785 369 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 EVI2BP34910 448 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 PNLIPRP2P54317 469 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 CORO7P57737 925 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 CHRNB3Q05901 458 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 CARTPTQ16568 116 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 ZSWIM7Q19AV6 140 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 TRMT12Q53H54 448 aaKnown RBP12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 CDKL4Q5MAI5 379 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 LGSNQ5TDP6 509 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 SULT1C3Q6IMI6 304 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 TBC1D1Q86TI0 1168 aaPredicted RBP12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 TDRPQ86YL5 185 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 RNF10Q8N5U6 811 aaKnown RBP12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 LINC01356Q8N9X3 169 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 MUCL1Q96DR8 90 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 SORCS2Q96PQ0 1159 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 NAP1L3Q99457 506 aaPredicted RBP12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 RTN4RQ9BZR6 473 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 STOML1Q9UBI4 398 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 ZKSCAN5Q9Y2L8 839 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 FKBP7Q9Y680 259 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 CAPN6Q9Y6Q1 641 aa12.23□□□□□ -0.45
NKX3-1-202ENST00000523261 ZNF814B7Z6K7 855 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 ADAMDEC1O15204 470 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 CCNT2O60583 730 aaKnown RBP12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 LYZL6O75951 148 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 IPO7O95373 1038 aaKnown RBP12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 DHRS4L1P0CG22 281 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 PTX3P26022 381 aaPredicted RBP12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 KRT20P35900 424 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 STX5Q13190 355 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 TMEM201Q5SNT2 666 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 TIMM23BQ5SRD1 257 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 GTF2IRD2BQ6EKJ0 949 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 TMEM108Q6UXF1 575 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 NPSR1Q6W5P4 371 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 USP43Q70EL4 1123 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 GTF2IRD2Q86UP8 949 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 NUDT13Q86X67 352 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 EFHD2Q96C19 240 aaPredicted RBP12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 CERS2Q96G23 380 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 SAYSD1Q9NPB0 183 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 PCDHB10Q9UN67 800 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 TSC22D4Q9Y3Q8 395 aa12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 KMT2CQ8NEZ4 4911 aaKnown RBP12.22□□□□□ -0.45
NKX3-1-202ENST00000523261 FADS1O60427 444 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 NME6O75414 186 aaPredicted RBP12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 OPN1LWP04000 364 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 LIMS1P48059 325 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 DVL1P1P54792 670 aaPredicted RBP12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 CDH15P55291 814 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 TAS2R39P59534 338 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 GPX6P59796 221 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 DUSP2Q05923 314 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 SPANXN3Q5MJ09 141 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 GRHL2Q6ISB3 625 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 RAD9BQ6WBX8 426 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 Q6ZT83 130 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 SSX8Q7RTT4 187 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 LRRC70Q7Z2Q7 622 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 WDR75Q8IWA0 830 aaKnown RBP12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 TUSC5Q8IXB3 177 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 PDPRQ8NCN5 879 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 ZNF540Q8NDQ6 660 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 OR2W6PQ8NHA6 318 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 OR2V1Q8NHB1 315 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 UHMK1Q8TAS1 419 aaKnown RBP12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 RNF128Q8TEB7 428 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 DUSP19Q8WTR2 217 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 ABHD3Q8WU67 409 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 HPS1Q92902 700 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 MTBPQ96DY7 904 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 MYOZ1Q9NP98 299 aaPredicted RBP12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 SDHAF3Q9NRP4 125 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 KLHL13Q9P2N7 655 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 CES1P1Q9UKY3 287 aa12.21□□□□□ -0.45
NKX3-1-202ENST00000523261 A0A0J9YW62 118 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 TNFSF11O14788 317 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 LILRA1O75019 489 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 TTC4O95801 387 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 KRT14P02533 472 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 TACSTD2P09758 323 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 PCSK2P16519 638 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 PCMT1P22061 227 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 PTAFRP25105 342 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 CD40P25942 277 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 FEN1P39748 380 aaKnown RBP12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 MRPS22P82650 360 aaKnown RBP12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 MRPS35P82673 323 aaKnown RBP12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 SCGB2A2Q13296 93 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 CUL3Q13618 768 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms