RNA–Protein interactions for RNA: ENST00000522043.1

TOP1MT-215, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-215ENST00000522043 MARCH3Q86UD3 253 aa16.32■□□□□ 0.2
TOP1MT-215ENST00000522043 CDC20BQ86Y33 519 aa16.32■□□□□ 0.2
TOP1MT-215ENST00000522043 OR5M1Q8NGP8 315 aa16.32■□□□□ 0.2
TOP1MT-215ENST00000522043 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.32■□□□□ 0.2
TOP1MT-215ENST00000522043 FAM111AQ96PZ2 611 aa16.32■□□□□ 0.2
TOP1MT-215ENST00000522043 SFXN3Q9BWM7 321 aa16.32■□□□□ 0.2
TOP1MT-215ENST00000522043 CLEC4MQ9H2X3 399 aaPredicted RBP16.32■□□□□ 0.2
TOP1MT-215ENST00000522043 REEP4Q9H6H4 257 aa16.32■□□□□ 0.2
TOP1MT-215ENST00000522043 Q9N2J8 555 aa16.32■□□□□ 0.2
TOP1MT-215ENST00000522043 EFNA1P20827 205 aaPredicted RBP16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 RFX3P48380 749 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 SUCLG1P53597 346 aaKnown RBP16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 MRPS22P82650 360 aaKnown RBP16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 DECR1Q16698 335 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 ARL13AQ5H913 290 aaPredicted RBP16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 ZAR1Q86SH2 424 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 EXOC3L1Q86VI1 746 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 TWIST2Q8WVJ9 160 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 ZFP3Q96NJ6 502 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 TM9SF2Q99805 663 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 TRMOQ9BU70 441 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 EQTNQ9NQ60 294 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 CCM2LQ9NUG4 571 aaPredicted RBP16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 FAM120CQ9NX05 1096 aaKnown RBP16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 GALNT8Q9NY28 637 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 NTMQ9P121 344 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 LGALS13Q9UHV8 139 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 ST6GALNAC2Q9UJ37 374 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 MID2Q9UJV3 735 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 ZNF337Q9Y3M9 751 aa16.31■□□□□ 0.2
TOP1MT-215ENST00000522043 TUBAL3A6NHL2 446 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 PIP5K1BO14986 540 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 NPHS1O60500 1241 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 SPAG7O75391 227 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 NKX2-2O95096 273 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 UTS2O95399 124 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 FGF4P08620 206 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 ACP2P11117 423 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 PRPS2P11908 318 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 NEFHP12036 1026 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 HK1P19367 917 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 SORDQ00796 357 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 BCL2A1Q16548 175 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 GRAMD1BQ3KR37 738 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 GALNTL6Q49A17 601 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 EXOSC6Q5RKV6 272 aaKnown RBP16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 ZCCHC23Q6ZST2 131 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 GALNT10Q86SR1 603 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 LUZP2Q86TE4 346 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 DUSP19Q8WTR2 217 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 NUDT8Q8WV74 236 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 PPCDCQ96CD2 204 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 C1GALT1C1Q96EU7 318 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 LRRC46Q96FV0 321 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 RMND5BQ96G75 393 aaPredicted RBP16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 NPAS1Q99742 590 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 RBM24Q9BX46 236 aaKnown RBP16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 CXXC4Q9H2H0 198 aa16.3■□□□□ 0.2
TOP1MT-215ENST00000522043 ABCA4P78363 2273 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 IGLV3-32A0A0A0MS00 114 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 A0A1W2PNV4 684 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 OR2M5A3KFT3 312 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 SHISA8B8ZZ34 492 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 EPXP11678 715 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 BCKDHAP12694 445 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 GPC1P35052 558 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 PRR5P85299 388 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 ZNHIT3Q15649 155 aaPredicted RBP16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 TMEM44Q2T9K0 475 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 RAET1LQ5VY80 246 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 GRAMD2AQ8IUY3 354 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 UBQLNLQ8IYU4 475 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 RIBC1Q8N443 379 aaPredicted RBP16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 SLC16A11Q8NCK7 471 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 OR6Y1Q8NGX8 325 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 FBXO30Q8TB52 745 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 FAM110BQ8TC76 370 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 TCP10LQ8TDR4 215 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 AENQ8WTP8 325 aaKnown RBP16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 FIG4Q92562 907 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 NINJ1Q92982 152 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 C16orf58Q96GQ5 468 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 C3orf30Q96M34 536 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 KLHDC3Q9BQ90 382 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 SIRT3Q9NTG7 399 aaPredicted RBP16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 FBXO34Q9NWN3 711 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 SH3BP4Q9P0V3 963 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 TRAF6Q9Y4K3 522 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 VPS13CQ709C8 3753 aa16.29■□□□□ 0.2
TOP1MT-215ENST00000522043 ITPR3Q14573 2671 aa16.28■□□□□ 0.2
TOP1MT-215ENST00000522043 A0A1W2PPR1 153 aa16.28■□□□□ 0.2
TOP1MT-215ENST00000522043 A8MXE2 369 aa16.28■□□□□ 0.2
TOP1MT-215ENST00000522043 ANGPTL1O95841 491 aa16.28■□□□□ 0.2
TOP1MT-215ENST00000522043 PEPDP12955 493 aa16.28■□□□□ 0.2
TOP1MT-215ENST00000522043 CD1EP15812 388 aa16.28■□□□□ 0.2
TOP1MT-215ENST00000522043 PRKAG1P54619 331 aa16.28■□□□□ 0.2
TOP1MT-215ENST00000522043 CLDN20P56880 219 aa16.28■□□□□ 0.2
TOP1MT-215ENST00000522043 GANABQ14697 944 aaKnown RBP16.28■□□□□ 0.2
TOP1MT-215ENST00000522043 XKR7Q5GH72 579 aa16.28■□□□□ 0.2
TOP1MT-215ENST00000522043 VWA1Q6PCB0 445 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms