RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CSNK1G2-AS1Q8NCQ2 148 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 ICA1LQ8NDH6 482 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 RAET1EQ8TD07 263 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 SPRYD4Q8WW59 207 aaPredicted RBP2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 C18orf25Q96B23 403 aaPredicted RBP2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 UPRTQ96BW1 309 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 RAB3CQ96E17 227 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 DHTKD1Q96HY7 919 aaPredicted RBP2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 ANKRD27Q96NW4 1050 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZNF607Q96SK3 696 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 OPRPNQ99935 248 aaPredicted RBP2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 CABLES2Q9BTV7 478 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 DHX33Q9H6R0 707 aaKnown RBP2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 RCOR3Q9P2K3 495 aaPredicted RBP2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 CIDEBQ9UHD4 219 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 DHRS7Q9Y394 339 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 SPHKAPQ2M3C7 1700 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 MRC2Q9UBG0 1479 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 IQGAP1P46940 1657 aa2.75□□□□□ -1.97
HMGN1P28-201ENST00000521340 PLXNC1O60486 1568 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 ARHGEF5Q12774 1597 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 DISP1Q96F81 1524 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 ARHGEF12Q9NZN5 1544 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 IFT172Q9UG01 1749 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 KIF26BQ2KJY2 2108 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 MYOM1P52179 1685 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZC3H13Q5T200 1668 aaKnown RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 ADGRL2O95490 1459 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 NUP153P49790 1475 aaKnown RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 SHANK2Q9UPX8 1470 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 IGLV7-46A0A075B6I9 117 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 SYNJ2BP-COX16A0A087WUM0 186 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 PPIAL4CA0A0B4J2A2 164 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 A0A0J9YVX5 310 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 TEX48A0A1B0GUV7 120 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 CYSRT1A8MQ03 144 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 FAM220BPB1ANY3 271 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 BCAS1O75363 584 aaPredicted RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 SURF6O75683 361 aaKnown RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 FCGR3AP08637 254 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 PPIAL4GP0DN37 164 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 SLC1A4P43007 532 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 OR1D4P47884 311 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 LTB4RQ15722 352 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 SYPL1Q16563 259 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 TIGITQ495A1 244 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 GGTA1PQ4G0N0 100 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 GLIPR1L2Q4G1C9 344 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 C2CD6Q53TS8 623 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 CELF3Q5SZQ8 465 aaKnown RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 ATAD3BQ5T9A4 648 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 DDI2Q5TDH0 399 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 REG3GQ6UW15 175 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 P4HA3Q7Z4N8 544 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 LRRTM1Q86UE6 522 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 LINC01561Q8N1V8 128 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 C4orf32Q8N8J7 132 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 MIPOL1Q8TD10 442 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 PIGCQ92535 297 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 SLC41A3Q96GZ6 507 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 HPDLQ96IR7 371 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 SECISBP2Q96T21 854 aaKnown RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 FEM1AQ9BSK4 669 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 BARHL1Q9BZE3 327 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 UPF3AQ9H1J1 476 aaKnown RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 TUBB1Q9H4B7 451 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 ESM1Q9NQ30 184 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 FARSBQ9NSD9 589 aaKnown RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 DUS2Q9NX74 493 aaKnown RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 TAS2R16Q9NYV7 291 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 ANAPC7Q9UJX3 599 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 EIF3LQ9Y262 564 aaKnown RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 MRPS33Q9Y291 106 aaKnown RBP2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 SHROOM2Q13796 1616 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 IQGAP3Q86VI3 1631 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 MIA2Q96PC5 1412 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 CNTLNQ9NXG0 1405 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 MAST1Q9Y2H9 1570 aa2.74□□□□□ -1.97
HMGN1P28-201ENST00000521340 PZPP20742 1482 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 CAMSAP2Q08AD1 1489 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 RPRD2Q5VT52 1461 aaKnown RBP2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 EIF2AK4Q9P2K8 1649 aaKnown RBP2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 IGHV3OR16-12A0A075B7B8 117 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 MFSD2BA6NFX1 497 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 FOXI3A8MTJ6 420 aaPredicted RBP2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 TMCO5BA8MYB1 307 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 K7ERI5 159 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 PRRG1O14668 218 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 ARHGEF9O43307 516 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 LATO43561 262 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 RENP00797 406 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 GSTT2P0CG29 244 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 GSTT2BP0CG30 244 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 RPS2P15880 293 aaKnown RBP2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 RPA2P15927 270 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 ATP6V1C1P21283 382 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 TBXA2RP21731 343 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 BDKRB1P46663 353 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 PJVKQ0ZLH3 352 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms