RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 IL18Q14116 193 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 KIR2DS5Q14953 304 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 DUSP5Q16690 384 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 RNASE12Q5GAN4 147 aaKnown RBP9.51□□□□□ -0.89
MCF2-209ENST00000520602 MFSD12Q6NUT3 480 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 OR52R1Q8NGF1 315 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 OR51L1Q8NGJ5 315 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 ACOT11Q8WXI4 607 aaPredicted RBP9.51□□□□□ -0.89
MCF2-209ENST00000520602 TRNT1Q96Q11 434 aaKnown RBP9.51□□□□□ -0.89
MCF2-209ENST00000520602 SERHL2Q9H4I8 314 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 MKKSQ9NPJ1 570 aaPredicted RBP9.51□□□□□ -0.89
MCF2-209ENST00000520602 ADAM30Q9UKF2 790 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 DAPP1Q9UN19 280 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 ASB4Q9Y574 426 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 CACNA1IQ9P0X4 2223 aa9.51□□□□□ -0.89
MCF2-209ENST00000520602 TRAPPC13A5PLN9 417 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 UNC119BA6NIH7 251 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 BLOC1S5-TXNDC5H3BN57 136 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ARHGAP33O14559 1287 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 KHNYNO15037 678 aaKnown RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 AKAP8O43823 692 aaKnown RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 PRKYO43930 277 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 MRPS14O60783 128 aaKnown RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 CSTAP01040 98 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 MVDP53602 400 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 CRYZQ08257 329 aaKnown RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 CXXC5Q7LFL8 322 aaKnown RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 NKAIN4Q8IVV8 208 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ATP6V1C2Q8NEY4 427 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 BMFQ96LC9 184 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 SLC6A18Q96N87 628 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 DEPDC7Q96QD5 511 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 SLC30A2Q9BRI3 323 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 SIRT3Q9NTG7 399 aaPredicted RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 POT1Q9NUX5 634 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ZNF443Q9Y2A4 671 aaPredicted RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 TSC22D4Q9Y3Q8 395 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 COL4A6Q14031 1691 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 A0A087WUU8 490 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ELOA3DA6NLF2 546 aaPredicted RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 CTDSP2O14595 271 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 HCN1O60741 890 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 CTSVO60911 334 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 SLC25A12O75746 678 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 LGI1O95970 557 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ACVR2AP27037 513 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 TPTEP56180 551 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 PCBP4P57723 403 aaKnown RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 ADAM15Q13444 863 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 RUNX2Q13950 521 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ELOA3BQ3SY89 546 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 MRPL2Q5T653 305 aaKnown RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 DDI2Q5TDH0 399 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ACSM5Q6NUN0 579 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 KLBQ86Z14 1044 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 KIAA1958Q8N8K9 716 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 C7orf57Q8NEG2 295 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ELOA3Q8NG57 546 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 PDE7BQ9NP56 450 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ANAPC1Q9H1A4 1944 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 OR2W5A6NFC9 320 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 OR5F1O95221 314 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 BMP4P12644 408 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 GABRG2P18507 467 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 MYL9P24844 172 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 SLC15A1P46059 708 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 LGALS3BPQ08380 585 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 DMPKQ09013 629 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 DSG2Q14126 1118 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 IDNKQ5T6J7 187 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 KIAA0895LQ68EN5 471 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 FBXO42Q6P3S6 717 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 MZT2AQ6P582 158 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 DCDC5Q6ZRR9 648 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 CCDC80Q76M96 950 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 SFTPA2Q8IWL1 248 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 SLC44A3Q8N4M1 653 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 OR4F15Q8NGB8 312 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 OR6Q1Q8NGQ2 317 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 TMEM255BQ8WV15 326 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ZNF566Q969W8 418 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 PITX2Q99697 317 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 SEMA4GQ9NTN9 838 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 CNOT2Q9NZN8 540 aaKnown RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 SLC6A14Q9UN76 642 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 GPC6Q9Y625 555 aaPredicted RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 PLD2O14939 933 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 NARSO43776 548 aaKnown RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 POU2F2P09086 479 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 CD6P30203 668 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 GRK6P43250 576 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 BCAP31P51572 246 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 PPP5CP53041 499 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 PCBP3P57721 371 aaKnown RBP9.5□□□□□ -0.89
MCF2-209ENST00000520602 CTF1Q16619 201 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 ALG10BQ5I7T1 473 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 PAQR6Q6TCH4 344 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 SLC46A3Q7Z3Q1 461 aa9.5□□□□□ -0.89
MCF2-209ENST00000520602 OR5M3Q8NGP4 307 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms