RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SEL1L3Q68CR1 1132 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 PYHIN1Q6K0P9 492 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 RFWD3Q6PCD5 774 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 HSD11B1LQ7Z5J1 315 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 TMEM17Q86X19 198 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 ZNF683Q8IZ20 524 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 TRMT10AQ8TBZ6 339 aaKnown RBP4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 C9orf85Q96MD7 179 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 LRRC40Q9H9A6 602 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 MEAF6Q9HAF1 191 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 BARX2Q9UMQ3 279 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 WDR45Q9Y484 360 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 GMPPBQ9Y5P6 360 aa4.28□□□□□ -1.72
HMGB1P46-201ENST00000520062 NEBLO76041 1014 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 TM7SF2O76062 418 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 IGFBP1P08833 259 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 XRCC1P18887 633 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 TPSB2P20231 275 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 TBXA2RP21731 343 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 MT3P25713 68 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 ETV5P41161 510 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 NTHL1P78549 312 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 FCHO2Q0JRZ9 810 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 LRRC74AQ0VAA2 488 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 MESDQ14696 234 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 TPSAB1Q15661 275 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 MS4A13Q5J8X5 152 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 SLX4IPQ5VYV7 408 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 SCYL2Q6P3W7 929 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 STAC2Q6ZMT1 411 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 ERICH1Q86X53 443 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 ZNF679Q8IYX0 411 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 ANKFN1Q8N957 763 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 SYT14Q8NB59 555 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 CSNK1G2-AS1Q8NCQ2 148 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 EMG1Q92979 244 aaKnown RBP4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 PSMB7Q99436 277 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 CCT7Q99832 543 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 SENP1Q9P0U3 644 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 CRLS1Q9UJA2 301 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 ANAPC7Q9UJX3 599 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 RNF24Q9Y225 148 aa4.27□□□□□ -1.73
HMGB1P46-201ENST00000520062 RPL37AP8A6NKH3 93 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 TRIM3O75382 744 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 IGF1P05019 195 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 PVRP15151 417 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 SDC1P18827 310 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 PLA2G16P53816 162 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 UBE2HP62256 183 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 BDH1Q02338 343 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 PAX8Q06710 450 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 CAMK4Q16566 473 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 MAPK6Q16659 721 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 ZNF506Q5JVG8 444 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 DOK6Q6PKX4 331 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 METTL7BQ6UX53 244 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 LANCL3Q6ZV70 420 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 IFNEQ86WN2 208 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 ABHD12Q8N2K0 398 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 CLDN19Q8N6F1 224 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 ZSCAN4Q8NAM6 433 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 SUMF1Q8NBK3 374 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 CTNNBL1Q8WYA6 563 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 RAB3CQ96E17 227 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 KRTAP1-5Q9BYS1 174 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 POLR3FQ9H1D9 316 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 RHOJQ9H4E5 214 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 ELOVL3Q9HB03 270 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 FAM120CQ9NX05 1096 aaKnown RBP4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 UTP6Q9NYH9 597 aaKnown RBP4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 HPCAL4Q9UM19 191 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 NTNG1Q9Y2I2 539 aa4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 RRP15Q9Y3B9 282 aaKnown RBP4.26□□□□□ -1.73
HMGB1P46-201ENST00000520062 A0A1B0GTH9 108 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 TRABD2BA6NFA1 517 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 FAM74A7A6NL05 159 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 NUDT21O43809 227 aaKnown RBP4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 GPRIN2O60269 458 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 TPST2O60704 377 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 HMMRO75330 724 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 B3GAT3O94766 335 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 HBQ1P09105 142 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 H2AFZP0C0S5 128 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 HNF1AP20823 631 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 RPL4P36578 427 aaKnown RBP4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 BRCC3P46736 316 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 PLOD1Q02809 727 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 CHI3L2Q15782 390 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 SYPL1Q16563 259 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 TMEM44Q2T9K0 475 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 CNPY1Q3B7I2 92 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 MAJINQ3KP22 176 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 GLIPR1L2Q4G1C9 344 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 FAM74A3Q4VXF1 159 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 LGSNQ5TDP6 509 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 GCNT7Q6ZNI0 430 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 Q8N377 158 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 EIF1ADQ8N9N8 165 aaKnown RBP4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 TBCKQ8TEA7 893 aa4.25□□□□□ -1.73
HMGB1P46-201ENST00000520062 FAM3CQ92520 227 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms