RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 NBPF19A0A087WUL8 3843 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 CD8B2A6NJW9 211 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 FAM90A27PA6NNH2 459 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 SYT5O00445 386 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 BIRC5O15392 142 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 LYPLA1O75608 230 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-215ENST00000519474 NKX2-2O95096 273 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 IL33O95760 270 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 ACTL6AO96019 429 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 LAMP1P11279 417 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 PRPS2P11908 318 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 EFNA1P20827 205 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-215ENST00000519474 NTSP30990 170 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 TIMP3P35625 211 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 KRT20P35900 424 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 ASMTP46597 345 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 SERPINB4P48594 390 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 PRKAG1P54619 331 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 GFRA1P56159 465 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 DLX5P56178 289 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 WNT3P56703 355 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 KRTAP10-9P60411 292 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 RPL38P63173 70 aaKnown RBP8.49□□□□□ -1.05
HDAC3-215ENST00000519474 PSPHP78330 225 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 HSPB3Q12988 150 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 MLC1Q15049 377 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 EXOSC6Q5RKV6 272 aaKnown RBP8.49□□□□□ -1.05
HDAC3-215ENST00000519474 IL23RQ5VWK5 629 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 NSUN5P2Q63ZY6 315 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 APOOLQ6UXV4 268 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 MARCH3Q86UD3 253 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 DMRTC2Q8IXT2 367 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-215ENST00000519474 SMYD1Q8NB12 490 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 NAXEQ8NCW5 288 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 NUP43Q8NFH3 380 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 OR7A2PQ8NGA2 310 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 CEP70Q8NHQ1 597 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 ZPLD1Q8TCW7 415 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 DUSP19Q8WTR2 217 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 COQ8BQ96D53 544 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 GIMAP5Q96F15 307 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 C14orf79Q96F83 325 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 C16orf58Q96GQ5 468 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 ZIM3Q96PE6 472 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 OR2B2Q9GZK3 357 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 DSN1Q9H410 356 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 SSU72Q9NP77 194 aaKnown RBP8.49□□□□□ -1.05
HDAC3-215ENST00000519474 ACSS1Q9NUB1 689 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-215ENST00000519474 DDX18Q9NVP1 670 aaKnown RBP8.49□□□□□ -1.05
HDAC3-215ENST00000519474 FBXO34Q9NWN3 711 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 CAMK2AQ9UQM7 478 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 WIF1Q9Y5W5 379 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 NAV2Q8IVL1 2488 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 EXPH5Q8NEV8 1989 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 MED12Q93074 2177 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 PKDREJQ9NTG1 2253 aa8.49□□□□□ -1.05
HDAC3-215ENST00000519474 CACNA1CQ13936 2221 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 A0A1W2PRB8 838 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 HSPB2A8KAH6 182 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 PDPK1O15530 556 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 EMC8O43402 210 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 SERPINE1P05121 402 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 TUBBP07437 444 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 GRK2P25098 689 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 MSX1P28360 303 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 IL12BP29460 328 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 SRD5A2P31213 254 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 B3GALT5-AS1P59052 145 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 ABCE1P61221 599 aaKnown RBP8.48□□□□□ -1.05
HDAC3-215ENST00000519474 MRPS22P82650 360 aaKnown RBP8.48□□□□□ -1.05
HDAC3-215ENST00000519474 EMX2Q04743 252 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 CHI3L2Q15782 390 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 HSPB2Q16082 182 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 DECR1Q16698 335 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 ACSF3Q4G176 576 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-215ENST00000519474 CEP85LQ5SZL2 805 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 LRIG3Q6UXM1 1119 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 GDF7Q7Z4P5 450 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 R3HCC1LQ7Z5L2 792 aaKnown RBP8.48□□□□□ -1.05
HDAC3-215ENST00000519474 ADGRE4PQ86SQ3 457 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 RIMKLAQ8IXN7 391 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 PM20D2Q8IYS1 436 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 FADS6Q8N9I5 356 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 SLC16A11Q8NCK7 471 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 OR2M3Q8NG83 312 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 OR4C3Q8NH37 302 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 PIK3R3Q92569 461 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 ZBED6CLQ96FA7 236 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-215ENST00000519474 UCN2Q96RP3 112 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 TRIB1Q96RU8 372 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 G6PC3Q9BUM1 346 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 CALHM2Q9HA72 323 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 C3orf14Q9HBI5 128 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 Q9N2J8 555 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 KCNK9Q9NPC2 374 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 SIRT3Q9NTG7 399 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-215ENST00000519474 TAS2R10Q9NYW0 307 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 MED11Q9P086 117 aa8.48□□□□□ -1.05
HDAC3-215ENST00000519474 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-215ENST00000519474 NUP214P35658 2090 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms