RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 NXPH1P58417 271 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 SNRPGP62308 76 aaKnown RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 ST3GAL4Q11206 333 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 GRM7Q14831 915 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 EXOSC7Q15024 291 aaKnown RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 ENTPD8Q5MY95 495 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 SYT6Q5T7P8 510 aaPredicted RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 MFSD4BQ5TF39 518 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 UBE2UQ5VVX9 321 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 TMEM236Q5W0B7 351 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 C12orf73Q69YU5 71 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 TYW3Q6IPR3 259 aaKnown RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 ZNF770Q6IQ21 691 aaPredicted RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 C16orf87Q6PH81 154 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 C11orf74Q86VG3 221 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 CCDC71Q8IV32 467 aaPredicted RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 SFTPA2Q8IWL1 248 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 CDK20Q8IZL9 346 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 SUMF1Q8NBK3 374 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 B3GNT7Q8NFL0 401 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 OR4D11Q8NGI4 311 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 SLC7A13Q8TCU3 470 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 ACOT11Q8WXI4 607 aaPredicted RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 OSTF1Q92882 214 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 MMABQ96EY8 250 aaPredicted RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 SLC41A3Q96GZ6 507 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 RBM18Q96H35 190 aaKnown RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 PEX11GQ96HA9 241 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 IL4I1Q96RQ9 567 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 MAP3K3Q99759 626 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 OCEL1Q9H607 264 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 MAT2BQ9NZL9 334 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 DNAJC27Q9NZQ0 273 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 RPS6KB2Q9UBS0 482 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 TESQ9UGI8 421 aaKnown RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 KLHL3Q9UH77 587 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 NDOR1Q9UHB4 597 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 ERGIC3Q9Y282 383 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 TMEM5Q9Y2B1 443 aa10.04□□□□□ -0.8
SPIDR-204ENST00000517824 KMT2BQ9UMN6 2715 aaPredicted RBP10.04□□□□□ -0.8
SPIDR-204ENST00000517824 A0A1W2PR77 199 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 TRAPPC13A5PLN9 417 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 TTC36A6NLP5 189 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 EFCAB9A8MZ26 197 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 CYR61O00622 381 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 FRS3O43559 492 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 AIREO43918 545 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 KIAA0513O60268 411 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 SDC3O75056 442 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 NSA2O95478 260 aaKnown RBP10.03□□□□□ -0.8
SPIDR-204ENST00000517824 WNT1P04628 370 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 RPLP0P05388 317 aaKnown RBP10.03□□□□□ -0.8
SPIDR-204ENST00000517824 LCKP06239 509 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 STSP08842 583 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 HSMCR30P0CW71 290 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 PIPP12273 146 aaPredicted RBP10.03□□□□□ -0.8
SPIDR-204ENST00000517824 ZNF182P17025 639 aaPredicted RBP10.03□□□□□ -0.8
SPIDR-204ENST00000517824 MMP11P24347 488 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 STAT5AP42229 794 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 PCYT1AP49585 367 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 AFF3P51826 1226 aaKnown RBP10.03□□□□□ -0.8
SPIDR-204ENST00000517824 TSPAN31Q12999 210 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 DUSP8Q13202 625 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 SERTAD2Q14140 314 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 GINS1Q14691 196 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 MED22Q15528 200 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 SNAPC1Q16533 368 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 DECR1Q16698 335 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 ZSWIM7Q19AV6 140 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 PRICKLE4Q2TBC4 344 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 PRTGQ2VWP7 1150 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 FLYWCH1Q4VC44 716 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 TRMT12Q53H54 448 aaKnown RBP10.03□□□□□ -0.8
SPIDR-204ENST00000517824 CCNJQ5T5M9 372 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 SLC27A4Q6P1M0 643 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 ZC3H14Q6PJT7 736 aaKnown RBP10.03□□□□□ -0.8
SPIDR-204ENST00000517824 CD300LDQ6UXZ3 194 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 SLCO6A1Q86UG4 719 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 CCDC103Q8IW40 242 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 TCEANCQ8N8B7 351 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 OR52R1Q8NGF1 315 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 S100ZQ8WXG8 99 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 GGHQ92820 318 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 RIT1Q92963 219 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 UBE2FQ969M7 185 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 YIPF6Q96EC8 236 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 ZHX1-C8orf76Q96EF9 292 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 FAM46AQ96IP4 442 aaKnown RBP10.03□□□□□ -0.8
SPIDR-204ENST00000517824 ZNF578Q96N58 590 aaPredicted RBP10.03□□□□□ -0.8
SPIDR-204ENST00000517824 SDF2Q99470 211 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 ZNF559Q9BR84 538 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 ORAI3Q9BRQ5 295 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 RHNO1Q9BSD3 238 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 IER2Q9BTL4 223 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 CNPPD1Q9BV87 410 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 MND1Q9BWT6 205 aa10.03□□□□□ -0.8
SPIDR-204ENST00000517824 WDR12Q9GZL7 423 aaKnown RBP10.03□□□□□ -0.8
SPIDR-204ENST00000517824 ZNF350Q9GZX5 532 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms