RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CACNG1Q06432 222 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 PUDPQ08623 228 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 ABRQ12979 859 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 BECN1Q14457 450 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 EXOSC7Q15024 291 aaKnown RBP-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 POSTNQ15063 836 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 ADCK5Q3MIX3 580 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZNF660Q6AZW8 331 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZNF595Q8IYB9 648 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 APCDD1Q8J025 514 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 CAMKVQ8NCB2 501 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 APPL2Q8NEU8 664 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 FNDC8Q8TC99 324 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 SLAMF9Q96A28 289 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 MS4A10Q96PG2 267 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 NAA38Q9BRA0 125 aaKnown RBP-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 DUSP16Q9BY84 665 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 SPATC1LQ9H0A9 340 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 CALHM2Q9HA72 323 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 CDH20Q9HBT6 801 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 EQTNQ9NQ60 294 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 IRAK4Q9NWZ3 460 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 UBQLN1Q9UMX0 589 aaKnown RBP-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 AGTPBP1Q9UPW5 1226 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZNF106Q9H2Y7 1883 aaKnown RBP-1.97□□□□□ -2.73
RNU6-539P-201ENST00000516665 COL4A2P08572 1712 aa-1.97□□□□□ -2.73
RNU6-539P-201ENST00000516665 CRB1P82279 1406 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 FAM237BA0A1B0GVD1 139 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 TMEM223A0PJW6 202 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 A8MUI8 341 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 H7C0S8 307 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 HS6ST1O60243 411 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 ZNF780AO75290 641 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 CSN3P07498 182 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 GLP1RP43220 463 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 SYKP43405 635 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 MTIF2P46199 727 aaKnown RBP-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 STARP49675 285 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 PRMT2P55345 433 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 SLC7A9P82251 487 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 ICA1Q05084 483 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 CXCL9Q07325 125 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 PIGHQ14442 188 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 RFX4Q33E94 735 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 KDM7AQ6ZMT4 941 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 STOX1Q6ZVD7 989 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 KIAA1328Q86T90 577 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 OR2A12Q8NGT7 310 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 ATP6V0A1Q93050 837 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 ODF3Q96PU9 254 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 SRSF8Q9BRL6 282 aaKnown RBP-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 ALKBH7Q9BT30 221 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 POLR2J2Q9GZM3 115 aaKnown RBP-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 POLR2J3Q9H1A7 115 aaKnown RBP-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 C5orf66Q9H5L9 145 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 RPP21Q9H633 154 aaKnown RBP-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 OPA3Q9H6K4 179 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 ZFP14Q9HCL3 533 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 S100A14Q9HCY8 104 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 DNAJC4Q9NNZ3 241 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 TAS2R1Q9NYW7 299 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 OR1A1Q9P1Q5 309 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 U3KQK5 164 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 TENM2Q9NT68 2774 aa-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 MN1Q10571 1320 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-539P-201ENST00000516665 ADAMTS7Q9UKP4 1686 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 A0A1B0GUH1 482 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 NPIPA2E9PIF3 369 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 NPIPA3F8WFD2 350 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 TLR4O00206 839 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 ADAMDEC1O15204 470 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 IGHDP01880 384 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 HLA-DQA1P01909 254 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 CENPBP07199 599 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 CTSGP08311 255 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 ZNF18P17022 549 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 NTSP30990 170 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 EMX1Q04741 257 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 TGM3Q08188 693 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 LOXL1Q08397 574 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 C2orf54Q08AI8 447 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 ARFRP1Q13795 201 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 PTK6Q13882 451 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 MORC3Q14149 939 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 SIM2Q14190 667 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 RNF187Q5TA31 235 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 GKAP1Q5VSY0 366 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 SNX30Q5VWJ9 437 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 KIAA0930Q6ICG6 404 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 C16orf47Q6ZP98 133 aaPredicted RBP-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 TMPPEQ6ZT21 453 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 FAM92BQ6ZTR7 304 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 LCA5Q86VQ0 697 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 CSNK1A1LQ8N752 337 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 ZNF645Q8N7E2 425 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 CCDC63Q8NA47 563 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 ACER1Q8TDN7 264 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 PYCR2Q96C36 320 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 BPIFA2Q96DR5 249 aa-1.99□□□□□ -2.73
RNU6-539P-201ENST00000516665 FAM124BQ9H5Z6 455 aaPredicted RBP-1.99□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms