RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 UCP1P25874 307 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 GLP1RP43220 463 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 RARSP54136 660 aaKnown RBP-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 SLC7A9P82251 487 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 NIPAL4Q0D2K0 466 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 ABRQ12979 859 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 CUL3Q13618 768 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 GK2Q14410 553 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 EXOSC7Q15024 291 aaKnown RBP-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 RFX4Q33E94 735 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 METTL11BQ5VVY1 283 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 TTC27Q6P3X3 843 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 KIAA1328Q86T90 577 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 PRUNE1Q86TP1 453 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 RALGPS2Q86X27 583 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 ARMC8Q8IUR7 673 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 MCEMP1Q8IX19 187 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 APCDD1Q8J025 514 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 OR8H1Q8NGG4 311 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 OR2A12Q8NGT7 310 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 OR9A1PQ8NGU1 263 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 FNDC8Q8TC99 324 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 SMARCE1Q969G3 411 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 SLC35C1Q96A29 364 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 BIRC7Q96CA5 298 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 OBSCN-AS1Q96MR7 158 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 ODF3Q96PU9 254 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 TMEM121Q9BTD3 319 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 XKR8Q9H6D3 395 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 CALHM2Q9HA72 323 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 IARS2Q9NSE4 1012 aaKnown RBP-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 DNAJC11Q9NVH1 559 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 SWAP70Q9UH65 585 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 RNF150Q9ULK6 438 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 U3KQK5 164 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 TSPOAP1O95153 1857 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 PCDH15Q96QU1 1955 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 KIAA1671Q9BY89 1806 aa-1.66□□□□□ -2.67
RNU6-542P-201ENST00000516405 A0A087WZY1 265 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 TMEM223A0PJW6 202 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 A8MUI8 341 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 K7ENP7 123 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 TSPAN4O14817 238 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 CLN5O75503 358 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 RPS6KA5O75582 802 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 OXTP01178 125 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 PENKP01210 267 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 CSTBP04080 98 aaKnown RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 LYNP07948 512 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 SRPRAP08240 638 aaKnown RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 GOLGA6DP0CG33 693 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 EPCAMP16422 314 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF18P17022 549 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 TMEM11P17152 192 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 NF2P35240 595 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 SYKP43405 635 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 UBE2AP49459 152 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 SIRPAP78324 504 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 TMF1P82094 1093 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 PUDPQ08623 228 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 SLC12A1Q13621 1099 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 BECN1Q14457 450 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 ASTE1Q2TB18 679 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF542PQ5EBM4 170 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 C10orf91Q5T1B1 145 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 DDX59Q5T1V6 619 aaKnown RBP eCLIP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 CPTPQ5TA50 214 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 PRR27Q6MZM9 219 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 GIMAP6Q6P9H5 292 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 KDM7AQ6ZMT4 941 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 C16orf47Q6ZP98 133 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 MOB2Q70IA6 237 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 LCA5Q86VQ0 697 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 PARGQ86W56 976 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF595Q8IYB9 648 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 CSNK1A1LQ8N752 337 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 PDCD6IPQ8WUM4 868 aaKnown RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 ATP6V0A1Q93050 837 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 MOAP1Q96BY2 351 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 PERPQ96FX8 193 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 PCED1BQ96HM7 432 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 DRC1Q96MC2 740 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 RAB34Q9BZG1 259 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 SPATC1LQ9H0A9 340 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 FAM124BQ9H5Z6 455 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 RPP21Q9H633 154 aaKnown RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 Q9HAA7 133 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 C12orf10Q9HB07 376 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZFP14Q9HCL3 533 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 DNAJC4Q9NNZ3 241 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 RRP7BPQ9NSQ0 103 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 IRAK4Q9NWZ3 460 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 TAS2R1Q9NYW7 299 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 OR1A1Q9P1Q5 309 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 UBQLN1Q9UMX0 589 aaKnown RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 AGTPBP1Q9UPW5 1226 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 SOX21Q9Y651 276 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 BAZ2AQ9UIF9 1905 aaKnown RBP-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 ADGRA3Q8IWK6 1321 aa-1.66□□□□□ -2.68
RNU6-542P-201ENST00000516405 CNTRLQ7Z7A1 2325 aa-1.67□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms