RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 PIP5K1BO14986 540 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 LSM1O15116 133 aaKnown RBP12.38□□□□□ -0.43
TCOF1-215ENST00000515516 FADS1O60427 444 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 UTS2O95399 124 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 CHRNGP07510 517 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 CD1EP15812 388 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 ZNF708P17019 499 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 C17orf67Q0P5P2 114 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 OR2A2Q6IF42 318 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 POMZP3Q6PJE2 187 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 MARCH3Q86UD3 253 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 UBQLNLQ8IYU4 475 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 FADS6Q8N9I5 356 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 CLHC1Q8NHS4 586 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 PPP1R14CQ8TAE6 165 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 AGR3Q8TD06 166 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 TCP10LQ8TDR4 215 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 RMND5BQ96G75 393 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-215ENST00000515516 FCRL1Q96LA6 429 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 PIGQQ9BRB3 760 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 GPATCH1Q9BRR8 931 aaKnown RBP12.38□□□□□ -0.43
TCOF1-215ENST00000515516 MECRQ9BV79 373 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 RBM24Q9BX46 236 aaKnown RBP12.38□□□□□ -0.43
TCOF1-215ENST00000515516 CLEC4MQ9H2X3 399 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-215ENST00000515516 PIGMQ9H3S5 423 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 TUBB1Q9H4B7 451 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 ACSS1Q9NUB1 689 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-215ENST00000515516 SLC17A7Q9P2U7 560 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 STOML1Q9UBI4 398 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 EML6Q6ZMW3 1958 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 PHF3Q92576 2039 aaKnown RBP12.37□□□□□ -0.43
TCOF1-215ENST00000515516 GXYLT2A0PJZ3 443 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 A6NNC1 897 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 EMC8O43402 210 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 ALOX5P09917 674 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 EPXP11678 715 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 BCKDHAP12694 445 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 HPGDP15428 266 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 DNAJA1P31689 397 aaKnown RBP12.37□□□□□ -0.43
TCOF1-215ENST00000515516 PRIM2P49643 509 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 CLDN18P56856 261 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 PRR5P85299 388 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 SORDQ00796 357 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 GLYR1Q49A26 553 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-215ENST00000515516 ATP6AP1LQ52LC2 224 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 ZCCHC12Q6PEW1 402 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 ADGRE4PQ86SQ3 457 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 LUZP2Q86TE4 346 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 PIK3R3Q92569 461 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 CHMP6Q96FZ7 201 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 MS4A4EQ96PG1 132 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 PRPF18Q99633 342 aaKnown RBP12.37□□□□□ -0.43
TCOF1-215ENST00000515516 YIPF4Q9BSR8 244 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 RASSF1Q9NS23 344 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 FLRT3Q9NZU0 649 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 CLCF1Q9UBD9 225 aa12.37□□□□□ -0.43
TCOF1-215ENST00000515516 NINQ8N4C6 2090 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 SLC22A20A6NK97 555 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 TMEM233B4DJY2 109 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 GMFGO60234 142 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 PEX11AO75192 247 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 NKX2-2O95096 273 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 SLU7O95391 586 aaKnown RBP12.36□□□□□ -0.43
TCOF1-215ENST00000515516 ANGPTL1O95841 491 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 ART1P52961 327 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 B3GALT5-AS1P59052 145 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 RPS3AP61247 264 aaKnown RBP12.36□□□□□ -0.43
TCOF1-215ENST00000515516 FOXF2Q12947 444 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 PDE7AQ13946 482 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 DAZAP2Q15038 168 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-215ENST00000515516 GRAMD1BQ3KR37 738 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 ZNF385BQ569K4 471 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 SPNS3Q6ZMD2 512 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 ZCCHC23Q6ZST2 131 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 EXOC3L1Q86VI1 746 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 GCNT2Q8N0V5 402 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 NATD1Q8N6N6 113 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 OR6Y1Q8NGX8 325 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 LINC01560Q8TB33 94 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 AENQ8WTP8 325 aaKnown RBP12.36□□□□□ -0.43
TCOF1-215ENST00000515516 JADE3Q92613 823 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 NINJ1Q92982 152 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 CAVIN3Q969G5 261 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 C1GALT1C1Q96EU7 318 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 ATAD3AQ9NVI7 634 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 JKAMPQ9P055 326 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 SNX8Q9Y5X2 465 aa12.36□□□□□ -0.43
TCOF1-215ENST00000515516 ADGRG4Q8IZF6 3080 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 A0A1W2PRB8 838 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 C17orf51A8MQB3 221 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 H3BML4 177 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 CASKO14936 926 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 SCAMP2O15127 329 aaKnown RBP12.35□□□□□ -0.43
TCOF1-215ENST00000515516 SEC14L5O43304 696 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 CTIFO43310 598 aaKnown RBP12.35□□□□□ -0.43
TCOF1-215ENST00000515516 HCRTR2O43614 444 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 NDUFB5O43674 189 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 LYPLA1O75608 230 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-215ENST00000515516 HSPA4LO95757 839 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 CRHP06850 196 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms