RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 WBP4O75554 376 aaKnown RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 KCNK2O95069 426 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 ANGPTL1O95841 491 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 CLPSP04118 112 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 SYPP08247 313 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 CYC1P08574 325 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 CKMT1AP12532 417 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 IL7RP16871 459 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 DRD5P21918 477 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 FUT4P22083 530 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 EPHA2P29317 976 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 LCN1P31025 176 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 GABRA3P34903 492 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 PPM1FP49593 454 aaPredicted RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 SEPHS1P49903 392 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 DUSP3P51452 185 aaPredicted RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 ZNF136P52737 540 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 CDH15P55291 814 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 SH3BGRP55822 239 aaPredicted RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 RGS8P57771 180 aaPredicted RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 PSPHP78330 225 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 SLC35A2P78381 396 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 BTG2P78543 158 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 IL1RL1Q01638 556 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 ZNF155Q12901 538 aaPredicted RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 PIN1Q13526 163 aaPredicted RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 COL9A2Q14055 689 aaPredicted RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 KCNAB1Q14722 419 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 PTGES3Q15185 160 aaKnown RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 ZNF141Q15928 474 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 SYT16Q17RD7 645 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.77□□□□□ -1.17
RNF4-220ENST00000513578 AMZ1Q400G9 498 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 FGD3Q5JSP0 725 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 PERM1Q5SV97 790 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 SLX4IPQ5VYV7 408 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 RHBDD2Q6NTF9 364 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 GUSBP11Q6P575 273 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 PODNL1Q6PEZ8 512 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 TTLL10Q6ZVT0 673 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 OLIG3Q7RTU3 272 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 BMP8AQ7Z5Y6 402 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 B3GNT8Q7Z7M8 397 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 GATAD2AQ86YP4 633 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 CMIPQ8IY22 773 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 ENTHD1Q8IYW4 607 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 SPARTQ8N0X7 666 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 CLIP4Q8N3C7 705 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 Q8N9G6 341 aaPredicted RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 GNPDA2Q8TDQ7 276 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 GPR151Q8TDV0 419 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 LOXL4Q96JB6 756 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 ART5Q96L15 291 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 SIGLEC11Q96RL6 698 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 NUDT22Q9BRQ3 303 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 G6PC3Q9BUM1 346 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 OR10A5Q9H207 317 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 ADNPQ9H2P0 1102 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 LRRN3Q9H3W5 708 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 VCX3AQ9NNX9 186 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 MKKSQ9NPJ1 570 aaPredicted RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 FGF21Q9NSA1 209 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 RYDENQ9NUL5 291 aaKnown RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 C14orf105Q9NVL8 296 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 RHCGQ9UBD6 479 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 TESQ9UGI8 421 aaKnown RBP7.77□□□□□ -1.17
RNF4-220ENST00000513578 KLHL3Q9UH77 587 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 MKLN1Q9UL63 735 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 RNF6Q9Y252 685 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 PCDHGB2Q9Y5G2 931 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 COMMD3-BMI1R4GMX3 469 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 CFAP54Q96N23 3096 aa7.77□□□□□ -1.17
RNF4-220ENST00000513578 SPTBN4Q9H254 2564 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 A0A087WUU8 490 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 TCRBV16S1A1N1A0A5B0 115 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 GXYLT2A0PJZ3 443 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 SH3D21A4FU49 640 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 DYRK3O43781 588 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 OR10H3O60404 316 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 NME6O75414 186 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 SEC14L2O76054 403 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 IGKV3-11P04433 115 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 TP53P04637 393 aaPredicted RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 HTR1AP08908 422 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 HBQ1P09105 142 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 CCNYL3P0C7X3 344 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 CT45A8P0DMV1 189 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 CT45A9P0DMV2 189 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 CYP4B1P13584 511 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 ITIH1P19827 911 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 AGXTP21549 392 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 FBLP22087 321 aaKnown RBP7.76□□□□□ -1.17
RNF4-220ENST00000513578 CHMP24386 653 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 ADH7P40394 386 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 PPICP45877 212 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 GSSP48637 474 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 TAS2R41P59536 307 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 CDC42P60953 191 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 DCAF7P61962 342 aa7.76□□□□□ -1.17
RNF4-220ENST00000513578 SNRPGP62308 76 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms