RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SMNDC1O75940 238 aaKnown RBP eCLIP11.34□□□□□ -0.594e-18■□□□□ 9.1
VEGFA-216ENST00000512683 CGAP01215 116 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 IL3P08700 152 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 MYL2P10916 166 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 POU2F1P14859 743 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 PAX1P15863 534 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 DDCP20711 480 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 EVI2BP34910 448 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 CRHR1P34998 444 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 UGT2B10P36537 528 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 POU4F3Q15319 338 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 DECR1Q16698 335 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 BTLAQ7Z6A9 289 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 EXOC3L1Q86VI1 746 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 SLC44A2Q8IWA5 706 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-216ENST00000512683 CCNYL1Q8N7R7 359 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 CNEP1R1Q8N9A8 125 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 OR2M3Q8NG83 312 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 OR9A2Q8NGT5 310 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 C16orf78Q8WTQ4 265 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 UBLCP1Q8WVY7 318 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-216ENST00000512683 GFM2Q969S9 779 aaKnown RBP11.34□□□□□ -0.59
VEGFA-216ENST00000512683 TRIM44Q96DX7 344 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-216ENST00000512683 CCDC126Q96EE4 140 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 ZNF845Q96IR2 970 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-216ENST00000512683 DOCK7Q96N67 2140 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 FAM111AQ96PZ2 611 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 OR10A4Q9H209 315 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 ANKRA2Q9H9E1 313 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 MID1IP1Q9NPA3 183 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 FAM120CQ9NX05 1096 aaKnown RBP11.34□□□□□ -0.59
VEGFA-216ENST00000512683 SENP1Q9P0U3 644 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 PPP4R1LQ9P1A2 415 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 C19orf53Q9UNZ5 99 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-216ENST00000512683 MPDZO75970 2070 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 JMJD1CQ15652 2540 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 IGLV3-32A0A0A0MS00 114 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 MYO1GB0I1T2 1018 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 NME6O75414 186 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-216ENST00000512683 TBXA2RP21731 343 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 TIA1P31483 386 aaKnown RBP eCLIP11.33□□□□□ -0.69e-14■■■□□ 15.1
VEGFA-216ENST00000512683 CPOXP36551 454 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 CORO7P57737 925 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 DNAJB13P59910 316 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 PSG6Q00889 435 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 C17orf67Q0P5P2 114 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 ZNHIT3Q15649 155 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-216ENST00000512683 PRSS53Q2L4Q9 553 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 Q5PR19 223 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 OR5M10Q6IEU7 315 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 NPSR1Q6W5P4 371 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 FRMD7Q6ZUT3 714 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 FAM214BQ7L5A3 538 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.33□□□□□ -0.62e-10■■■■■ 37.7
VEGFA-216ENST00000512683 EPS8L3Q8TE67 593 aaKnown RBP11.33□□□□□ -0.6
VEGFA-216ENST00000512683 KAT2AQ92830 837 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 EXOSC8Q96B26 276 aaKnown RBP11.33□□□□□ -0.6
VEGFA-216ENST00000512683 BBS4Q96RK4 519 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 GSX2Q9BZM3 304 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 IQCGQ9H095 443 aaKnown RBP11.33□□□□□ -0.6
VEGFA-216ENST00000512683 DSN1Q9H410 356 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 Q9N2J8 555 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 PLSCR4Q9NRQ2 329 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 GLRX2Q9NS18 164 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 OXSMQ9NWU1 459 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 ZNF337Q9Y3M9 751 aa11.33□□□□□ -0.6
VEGFA-216ENST00000512683 NSD1Q96L73 2696 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-216ENST00000512683 A0A087WZY1 265 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 SMIM23A6NLE4 172 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 IL33O95760 270 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 LY6G6DO95868 133 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 ANXA4P09525 319 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-216ENST00000512683 HK1P19367 917 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 LCN1P31025 176 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 CCT5P48643 541 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 NR1H2P55055 460 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 CLDN15P56746 228 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 SLC18A2Q05940 514 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 BTKQ06187 659 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 GUSBP1Q15486 140 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 CCDC153Q494R4 210 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 GTF2IRD2BQ6EKJ0 949 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 TRIM46Q7Z4K8 759 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 GTF2IRD2Q86UP8 949 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 OR2L13Q8N349 312 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 OR7G2Q8NG99 324 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 DUSP19Q8WTR2 217 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 NUDT8Q8WV74 236 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 C1GALT1C1Q96EU7 318 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 MARK4Q96L34 752 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 CCL19Q99731 98 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 SMR3AQ99954 134 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 USB1Q9BQ65 265 aaKnown RBP11.32□□□□□ -0.6
VEGFA-216ENST00000512683 EBPLQ9BY08 206 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 ANKZF1Q9H8Y5 726 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 PPCSQ9HAB8 311 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 KLHL28Q9NXS3 571 aa11.32□□□□□ -0.6
VEGFA-216ENST00000512683 C6orf203Q9P0P8 240 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-216ENST00000512683 PROCRQ9UNN8 238 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms