RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 NPRL3Q12980 569 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 ZNF141Q15928 474 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 MAPK14Q16539 360 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 TTC33Q6PID6 262 aaPredicted RBP22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 ZNF836Q6ZNA1 936 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 GRAMD2AQ8IUY3 354 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 MORN4Q8NDC4 146 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 ZNF721Q8TF20 911 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 CLIP3Q96DZ5 547 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 ZNF556Q9HAH1 456 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 FBXO34Q9NWN3 711 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 MKL2Q9ULH7 1088 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 SPTBP11277 2137 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 KMT2EQ8IZD2 1858 aa22.55■■□□□ 1.2
SPOCK3-221ENST00000512648 EFCAB7A8K855 629 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 NPIPB9F8W1W9 429 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 FMO6PO60774 539 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 CLIC3O95833 236 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 ADAP00813 363 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 LCN1P31025 176 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 ISL1P61371 349 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 PIN1Q13526 163 aaPredicted RBP22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 MFSD4BQ5TF39 518 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 FIGNL1Q6PIW4 674 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 TSPYL5Q86VY4 417 aaPredicted RBP22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 ZSCAN1Q8NBB4 408 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 SETD9Q8NE22 299 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 SLC2A12Q8TD20 617 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 DGCR6LQ9BY27 220 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 CBLCQ9ULV8 474 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 DTX4Q9Y2E6 619 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 TRBV4-1A0A0J9YWV2 114 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 SH3PXD2BA1X283 911 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 CDHR4A6H8M9 788 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 B4E171 279 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 POLR1CO15160 346 aaPredicted RBP22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 TPST2O60704 377 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 POLR2IP36954 125 aaKnown RBP22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 TSPAN7P41732 249 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 PSPHP78330 225 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 ST3GAL3Q11203 375 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 ILKQ13418 452 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 FLYWCH1Q4VC44 716 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 B3GNT8Q7Z7M8 397 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 GALNT5Q7Z7M9 940 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 LAPTM4BQ86VI4 370 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 SLC7A13Q8TCU3 470 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 DIO2Q92813 273 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 HRASLS5Q96KN8 279 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 C11orf16Q9NQ32 467 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 RXFP3Q9NSD7 469 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 MAN2C1Q9NTJ4 1040 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 RLIMQ9NVW2 624 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 TUBA8Q9NY65 449 aaPredicted RBP22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 RHCGQ9UBD6 479 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 CTSFQ9UBX1 484 aa22.54■■□□□ 1.2
SPOCK3-221ENST00000512648 BDP1A6H8Y1 2624 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 OR6C76A6NM76 312 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 AP3D1O14617 1153 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 BCKDKO14874 412 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 CPNE3O75131 537 aaKnown RBP22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 OR5F1O95221 314 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 CCNYL3P0C7X3 344 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 SMIM18P0DKX4 95 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 FUT4P22083 530 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 CLK3P49761 638 aaKnown RBP22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 RGS8P57771 180 aaPredicted RBP22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 APOFQ13790 326 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 CD300LDQ6UXZ3 194 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 CMIPQ8IY22 773 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 ITPAQ9BY32 194 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 MRPS26Q9BYN8 205 aaKnown RBP22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 HOXD1Q9GZZ0 328 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 RIBC2Q9H4K1 309 aa22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 PPIEQ9UNP9 301 aaKnown RBP22.53■■□□□ 1.2
SPOCK3-221ENST00000512648 FRG2CA6NGY1 282 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 TRIM64CA6NLI5 447 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 PRR33A8MZF0 331 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 TMX2-CTNND1H3BSU7 103 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 CBFA2T3O75081 653 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 CYP7B1O75881 506 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 GASTP01350 101 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 IGKV1D-16P01601 117 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 ZNF136P52737 540 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 ATP12AP54707 1039 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 ESRRGP62508 458 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 TUBA4AP68366 448 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 E2F1Q01094 437 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 COX10Q12887 443 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 TRAM2Q15035 370 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 RBM48Q5RL73 367 aaKnown RBP22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 PRR23CQ6ZRP0 262 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 HMGN2P46Q86SG4 172 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 SUMF1Q8NBK3 374 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 C17orf47Q8NEP4 570 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 OR4N2Q8NGD1 307 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 OR1N1Q8NGS0 311 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 HDAC2Q92769 488 aaKnown RBP22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 ADIPOR1Q96A54 375 aa22.52■■□□□ 1.2
SPOCK3-221ENST00000512648 APOL4Q9BPW4 351 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms