RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 TESMINQ9Y4I5 508 aa13.28□□□□□ -0.28
CCHCR1-229ENST00000512418 A0A1W2PPM1 405 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 A0A1W2PPR1 153 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 TNFRSF21O75509 655 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 SMNDC1O75940 238 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 IL33O95760 270 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 UROSP10746 265 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 CCT5P48643 541 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 DNAJB13P59910 316 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 SH2D5Q6ZV89 423 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 C1GALT1C1Q96EU7 318 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 PIGQQ9BRB3 760 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 RTN4RQ9BZR6 473 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 C3orf14Q9HBI5 128 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 NEUROD4Q9HD90 331 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 BEX4Q9NWD9 120 aaPredicted RBP13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 FLRT3Q9NZU0 649 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 ZNF337Q9Y3M9 751 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 ZNF175Q9Y473 711 aa13.27□□□□□ -0.29
CCHCR1-229ENST00000512418 NIPBLQ6KC79 2804 aaeCLIP13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 OR2M5A3KFT3 312 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 TTC36A6NLP5 189 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 NPIPB8E9PQR5 432 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 H3BML4 177 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 SEC14L5O43304 696 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 PLIN3O60664 434 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 KCNH1O95259 989 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 CD53P19397 219 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 PRPH2P23942 346 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 CD79BP40259 229 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 RFX3P48380 749 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 CLDN15P56746 228 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 OCRLQ01968 901 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 FAM27E3Q08E93 113 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 C17orf67Q0P5P2 114 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 FGFBP1Q14512 234 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 KIAA0040Q15053 153 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 VWA1Q6PCB0 445 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 WFDC11Q8NEX6 87 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 DUSP19Q8WTR2 217 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 FIG4Q92562 907 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 PGM2Q96G03 612 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 ZNF764Q96H86 408 aaPredicted RBP13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 EGLN2Q96KS0 407 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 RHOXF2Q9BQY4 288 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 PINK1Q9BXM7 581 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 TBL1XR1Q9BZK7 514 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 RNF122Q9H9V4 155 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 TNFRSF12AQ9NP84 129 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 CCL27Q9Y4X3 112 aa13.26□□□□□ -0.29
CCHCR1-229ENST00000512418 IGLV3-32A0A0A0MS00 114 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 H0YC42 278 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 EMC8O43402 210 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 SEC22BO75396 215 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 UTS2O95399 124 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 CPA3P15088 417 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 HOXC12P31275 282 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 GABRA3P34903 492 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 GPC1P35052 558 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 KIR2DL2P43627 348 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 SUCLG1P53597 346 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 TPD52P55327 224 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 SIRPAP78324 504 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 PRR5P85299 388 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 HSPB3Q12988 150 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 PON3Q15166 354 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 GLYR1Q49A26 553 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 ZNF551Q7Z340 670 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 BTLAQ7Z6A9 289 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 MARCH3Q86UD3 253 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 GSPT2Q8IYD1 628 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 METTL25Q8N6Q8 603 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 CCDC63Q8NA47 563 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 OR5M1Q8NGP8 315 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 FNDC9Q8TBE3 224 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 HOXB13Q92826 284 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 GFM2Q969S9 779 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 ZNF845Q96IR2 970 aaPredicted RBP13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 FAM111AQ96PZ2 611 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 SLC39A3Q9BRY0 314 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 IQCGQ9H095 443 aaKnown RBP13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 PPCSQ9HAB8 311 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 OXSMQ9NWU1 459 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 C1orf109Q9NX04 203 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 ELOVL5Q9NYP7 299 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 ZNF226Q9NYT6 803 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 AP4B1Q9Y6B7 739 aa13.25□□□□□ -0.29
CCHCR1-229ENST00000512418 SLC28A1O00337 649 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 PDPK1O15530 556 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 CTIFO43310 598 aaKnown RBP13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 RGS14O43566 566 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 ANGPTL1O95841 491 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 CD8BP10966 210 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 PRPS2P11908 318 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 FCGR2AP12318 317 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 HOXB4P17483 251 aaPredicted RBP13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 CCKARP32238 428 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 CRHR1P34998 444 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 CLDN20P56880 219 aa13.24□□□□□ -0.29
CCHCR1-229ENST00000512418 RPS3AP61247 264 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms