RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 GPR132Q9UNW8 380 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ATG4BQ9Y4P1 393 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLCO1B1Q9Y6L6 691 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 A0A1B0GTH6 734 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 A0A1W2PQ72 361 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 FAM90A27PA6NNH2 459 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SOBPA7XYQ1 873 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 KIAA1324LA8MWY0 1029 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MCIDASD6RGH6 385 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 M0R296 226 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 FCGR3BO75015 233 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PRAMEF1O95521 474 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 NADKO95544 446 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SBK3P0C264 359 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 OCM2P0CE71 109 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 CBSLP0DN79 551 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 IL9P15248 144 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ARSAP15289 507 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PNLIPP16233 465 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 AMPD1P23109 780 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACKR3P25106 362 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 TEAD1P28347 426 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 FMO4P31512 558 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 THBS4P35443 961 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 CBSP35520 551 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 GPR12P47775 334 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 WNT3AP56704 352 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PPIAP62937 165 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 POU6F2P78424 691 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 TWF1Q12792 350 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MRPL23Q16540 153 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PTCHD3Q3KNS1 767 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MIIPQ5JXC2 388 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PPM1LQ5SGD2 360 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PMS2CLQ68D20 193 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC8B1Q6J4K2 584 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 VWA1Q6PCB0 445 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SPESP1Q6UW49 350 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ASCL4Q6XD76 172 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PEX26Q7Z412 305 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 GPR141Q7Z602 305 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ADIPOR2Q86V24 386 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 CPXM2Q8N436 756 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 B3GALNT2Q8NCR0 500 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 FAM83FQ8NEG4 500 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MARCH1Q8TCQ1 289 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SPPL2AQ8TCT8 520 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SETD7Q8WTS6 366 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM174Q8WUU8 243 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SNX33Q8WV41 574 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ST8SIA1Q92185 356 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 KCNJ9Q92806 393 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 EMG1Q92979 244 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MCHR2Q969V1 340 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MARC2Q969Z3 335 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 TM4SF19Q96DZ7 209 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PCED1BQ96HM7 432 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF597Q96LX8 424 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SFXN2Q96NB2 322 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 CDK15Q96Q40 435 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR5B2Q96R09 309 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 P2RY13Q9BPV8 354 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 C20orf24Q9BUV8 137 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 NMNAT2Q9BZQ4 307 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 DCLRE1BQ9H816 532 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MARCH7Q9H992 704 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF701Q9NV72 531 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 SMPD4Q9NXE4 827 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 COPS7AQ9UBW8 275 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZFP69BQ9UJL9 534 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 IKZF3Q9UKT9 509 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PPP1R3CQ9UQK1 317 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 IRAK3Q9Y616 596 aa4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 MRPS18BQ9Y676 258 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 PDCD11Q14690 1871 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-208ENST00000511955 TRAV26-1A0A087WT03 109 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TBC1D3KA0A087X1G2 549 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 MROH6A6NGR9 719 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 PRSS29PA6NIE9 313 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 HEPACAM2A8MVW5 462 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC31A2O15432 143 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TEX33O43247 280 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 AQP9O43315 295 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 GUSBP08236 651 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 NR2F6P10588 404 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 FGF5P12034 268 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TCP1P17987 556 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ANXA7P20073 488 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 NDUFS1P28331 727 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 PBX1P40424 430 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 LHX1P48742 406 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 MRPL19P49406 292 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 PGDP52209 483 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ARF6P62330 175 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACSM2AQ08AH3 577 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC17A1Q14916 467 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TRAM2Q15035 370 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 ARL6IP1Q15041 203 aa4.68□□□□□ -1.66
TRAPPC11-208ENST00000511955 TRIP10Q15642 601 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms