RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 EFHD2Q96C19 240 aaPredicted RBP12.23□□□□□ -0.45
CLDND1-224ENST00000511667 PPCDCQ96CD2 204 aa12.23□□□□□ -0.45
CLDND1-224ENST00000511667 COQ8BQ96D53 544 aa12.23□□□□□ -0.45
CLDND1-224ENST00000511667 ZBED6CLQ96FA7 236 aaPredicted RBP12.23□□□□□ -0.45
CLDND1-224ENST00000511667 PGM2Q96G03 612 aa12.23□□□□□ -0.45
CLDND1-224ENST00000511667 PPP3R2Q96LZ3 170 aa12.23□□□□□ -0.45
CLDND1-224ENST00000511667 TSSK3Q96PN8 268 aa12.23□□□□□ -0.45
CLDND1-224ENST00000511667 DDX18Q9NVP1 670 aaKnown RBP12.23□□□□□ -0.45
CLDND1-224ENST00000511667 KLRF1Q9NZS2 232 aa12.23□□□□□ -0.45
CLDND1-224ENST00000511667 JKAMPQ9P055 326 aa12.23□□□□□ -0.45
CLDND1-224ENST00000511667 ZNF629Q9UEG4 869 aaPredicted RBP12.23□□□□□ -0.45
CLDND1-224ENST00000511667 CBLCQ9ULV8 474 aa12.23□□□□□ -0.45
CLDND1-224ENST00000511667 MED12LQ86YW9 2145 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 HSPB2A8KAH6 182 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 C17orf51A8MQB3 221 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 SYT5O00445 386 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 SCAMP2O15127 329 aaKnown RBP12.22□□□□□ -0.45
CLDND1-224ENST00000511667 TM9SF1O15321 606 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 CTIFO43310 598 aaKnown RBP12.22□□□□□ -0.45
CLDND1-224ENST00000511667 ITM2AO43736 263 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 LYPLA1O75608 230 aaPredicted RBP12.22□□□□□ -0.45
CLDND1-224ENST00000511667 TRAPPC6AO75865 159 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 PRPS2P11908 318 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 CHMP24386 653 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 EVI2BP34910 448 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 ZNF136P52737 540 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 CLDN18P56856 261 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 ZNF155Q12901 538 aaPredicted RBP12.22□□□□□ -0.45
CLDND1-224ENST00000511667 HSPB2Q16082 182 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 BCL2A1Q16548 175 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 TMEM44Q2T9K0 475 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 KRT71Q3SY84 523 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 ZCCHC12Q6PEW1 402 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 APOOLQ6UXV4 268 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 CAMKMTQ7Z624 323 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 BIVMQ86UB2 503 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 RELL2Q8NC24 303 aaPredicted RBP12.22□□□□□ -0.45
CLDND1-224ENST00000511667 TNIP2Q8NFZ5 429 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 GFM2Q969S9 779 aaKnown RBP12.22□□□□□ -0.45
CLDND1-224ENST00000511667 SORT1Q99523 831 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 SH3GL2Q99962 352 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 C20orf27Q9GZN8 174 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 EXO5Q9H790 373 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 GIN1Q9NXP7 522 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 FLRT3Q9NZU0 649 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 GIMAP2Q9UG22 337 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 MAPRE3Q9UPY8 281 aa12.22□□□□□ -0.45
CLDND1-224ENST00000511667 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.22□□□□□ -0.45
CLDND1-224ENST00000511667 GXYLT2A0PJZ3 443 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 FAM90A27PA6NNH2 459 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 KIAA1324LA8MWY0 1029 aaPredicted RBP12.21□□□□□ -0.45
CLDND1-224ENST00000511667 TMEM114B3SHH9 223 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 HCRTR2O43614 444 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 SNUPNO95149 360 aaKnown RBP12.21□□□□□ -0.45
CLDND1-224ENST00000511667 IL18BPO95998 194 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 SERPINE1P05121 402 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 LAMP1P11279 417 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 ZNF708P17019 499 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 IL12BP29460 328 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 DSCR4P56555 118 aaPredicted RBP12.21□□□□□ -0.45
CLDND1-224ENST00000511667 PRR5P85299 388 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 PTGR1Q14914 329 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 SF3B4Q15427 424 aaKnown RBP eCLIP12.21□□□□□ -0.45
CLDND1-224ENST00000511667 DECR1Q16698 335 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.21□□□□□ -0.45
CLDND1-224ENST00000511667 GALNTL6Q49A17 601 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 MFSD12Q6NUT3 480 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 R3HCC1LQ7Z5L2 792 aaKnown RBP12.21□□□□□ -0.45
CLDND1-224ENST00000511667 WDR53Q7Z5U6 358 aaPredicted RBP12.21□□□□□ -0.45
CLDND1-224ENST00000511667 TRIM42Q8IWZ5 723 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 DDIASQ8IXT1 998 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 LRRC34Q8IZ02 419 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 CDRT4Q8N9R6 151 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 OR2M3Q8NG83 312 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 CEP70Q8NHQ1 597 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 CLHC1Q8NHS4 586 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 ZFP28Q8NHY6 868 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 FAM120BQ96EK7 910 aaKnown RBP12.21□□□□□ -0.45
CLDND1-224ENST00000511667 ZNF395Q9H8N7 513 aaPredicted RBP12.21□□□□□ -0.45
CLDND1-224ENST00000511667 Q9N2J8 555 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 CLCF1Q9UBD9 225 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 KCNN3Q9UGI6 736 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 FIS1Q9Y3D6 152 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 L3MBTL1Q9Y468 752 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 OR10H1Q9Y4A9 318 aa12.21□□□□□ -0.45
CLDND1-224ENST00000511667 AKAP6Q13023 2319 aa12.21□□□□□ -0.46
CLDND1-224ENST00000511667 FN1P02751 2386 aaKnown RBP12.2□□□□□ -0.46
CLDND1-224ENST00000511667 ATRQ13535 2644 aa12.2□□□□□ -0.46
CLDND1-224ENST00000511667 ALG1L2C9J202 215 aa12.2□□□□□ -0.46
CLDND1-224ENST00000511667 RGS16O15492 202 aaPredicted RBP12.2□□□□□ -0.46
CLDND1-224ENST00000511667 AKAP10O43572 662 aa12.2□□□□□ -0.46
CLDND1-224ENST00000511667 PEX11AO75192 247 aa12.2□□□□□ -0.46
CLDND1-224ENST00000511667 ACP2P11117 423 aa12.2□□□□□ -0.46
CLDND1-224ENST00000511667 MAPK1P28482 360 aa12.2□□□□□ -0.46
CLDND1-224ENST00000511667 LCN1P31025 176 aa12.2□□□□□ -0.46
CLDND1-224ENST00000511667 KRT20P35900 424 aa12.2□□□□□ -0.46
CLDND1-224ENST00000511667 RPL3P39023 403 aaKnown RBP12.2□□□□□ -0.46
CLDND1-224ENST00000511667 SLC18A1P54219 525 aa12.2□□□□□ -0.46
CLDND1-224ENST00000511667 DIO3P55073 304 aa12.2□□□□□ -0.46
CLDND1-224ENST00000511667 WNT3P56703 355 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms