RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 TCAIMQ8N3R3 496 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 ZNF441Q8N8Z8 693 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 C9orf106Q8NAJ2 232 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 OR7G3Q8NG95 312 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 ARSGQ96EG1 525 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 C18orf12Q96KH6 178 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 ZNF597Q96LX8 424 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 RILPQ96NA2 401 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 TIMP4Q99727 224 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 ZNF717Q9BY31 904 aaPredicted RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 RPF2Q9H7B2 306 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 POPDC3Q9HBV1 291 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 RRAGDQ9NQL2 400 aaPredicted RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 FBXO34Q9NWN3 711 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 QPCTLQ9NXS2 382 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 MOCS1Q9NZB8 636 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CNIH4Q9P003 139 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 ZNF629Q9UEG4 869 aaPredicted RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 PTBP2Q9UKA9 531 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 CAMK2AQ9UQM7 478 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CHD3Q12873 2000 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 FREM1Q5H8C1 2179 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 AHRRA9YTQ3 701 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 EEF1E1-BLOC1S5C9J1V9 151 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 PAX4O43316 350 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 EEF1E1O43324 174 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 TMPRSS11DO60235 418 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 EEDO75530 441 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 TRAPPC6AO75865 159 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 SEC31AO94979 1220 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 ACSL3O95573 720 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 HPNP05981 417 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 INHBBP09529 407 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CT62P0C5K7 136 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CD53P19397 219 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 TIMP3P35625 211 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 PEX19P40855 299 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CASP2P42575 452 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 SLCO1A2P46721 670 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 PRIM2P49643 509 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CDK9P50750 372 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 RAC3P60763 192 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 FOXF2Q12947 444 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 DLG1Q12959 904 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 PDIA2Q13087 525 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 TBCCQ15814 346 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 AP5B1Q2VPB7 878 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 EIPR1Q53HC9 387 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 PAGE2BQ5JRK9 111 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 KHDRBS2Q5VWX1 349 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 NSUN5P2Q63ZY6 315 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 SULT1C3Q6IMI6 304 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CLEC9AQ6UXN8 241 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 SLC29A4Q7RTT9 530 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 LRRC70Q7Z2Q7 622 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 MAATS1Q7Z4T9 603 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 GPR180Q86V85 440 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 PRIMA1Q86XR5 153 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 LAS2Q8IYD9 372 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 PRR22Q8IZ63 422 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 ST13P4Q8IZP2 240 aaPredicted RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 CIARTQ8N365 385 aaPredicted RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 SLC15A4Q8N697 577 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 SRFBP1Q8NEF9 429 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 LRRC39Q96DD0 335 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 WDYHV1Q96HA8 205 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 TRIB1Q96RU8 372 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 KRT12Q99456 494 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CAPS2Q9BXY5 557 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 UGT2B28Q9BY64 529 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 TRIM31Q9BZY9 425 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 ROGDIQ9GZN7 287 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 C11orf54Q9H0W9 315 aaPredicted RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 CNOT10Q9H9A5 744 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 TEX10Q9NXF1 929 aaPredicted RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 CD274Q9NZQ7 290 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 JKAMPQ9P055 326 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 MTRF1LQ9UGC7 380 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 SNX12Q9UMY4 172 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CORO2BQ9UQ03 480 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 DTX4Q9Y2E6 619 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 C15orf41Q9Y2V0 281 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 SPACA6W5XKT8 324 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CR1P17927 2039 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 ALPK2Q86TB3 2170 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 IQANK1A0A1B0GTG1 560 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 A0A1W2PRX2 142 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 MBD3L4A6NDZ8 208 aaPredicted RBP6.03□□□□□ -1.44
COPS4-209ENST00000511653 MBD3L3A6NE82 208 aaPredicted RBP6.03□□□□□ -1.44
COPS4-209ENST00000511653 MBD3L5A6NJ08 208 aaPredicted RBP6.03□□□□□ -1.44
COPS4-209ENST00000511653 CD8B2A6NJW9 211 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 E7ESA3 106 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 UBXN8O00124 270 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 AIFM1O95831 613 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 BMP7P18075 431 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 NAGLUP54802 743 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 SLC12A2P55011 1212 aa6.03□□□□□ -1.44
COPS4-209ENST00000511653 ARL4CP56559 192 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms