RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 NDUFAF1Q9Y375 327 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 PCDHB14Q9Y5E9 798 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 ZNF462Q96JM2 2506 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 SVILO95425 2214 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 PINLYPA6NC86 204 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 LRRC3CA6NJW4 275 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 FAM166BA8MTA8 275 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 SNPHO15079 494 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 IGKV1D-16P01601 117 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 PLA2G2AP14555 144 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 HPGDP15428 266 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 HOXB9P17482 250 aaPredicted RBP11.77□□□□□ -0.53
COL6A6-203ENST00000511332 TDGF1P3P51864 188 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 PPIAP62937 165 aaKnown RBP11.77□□□□□ -0.53
COL6A6-203ENST00000511332 FOXO1Q12778 655 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 ELOAQ14241 798 aaKnown RBP11.77□□□□□ -0.53
COL6A6-203ENST00000511332 ARHGAP11BQ3KRB8 267 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 GTDC1Q4AE62 458 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 COQ5Q5HYK3 327 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 CCNJQ5T5M9 372 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 DESI1Q6ICB0 168 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 DHDDSQ86SQ9 333 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 SIAH3Q8IW03 269 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 FAM109AQ8N4B1 249 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 DPP10Q8N608 796 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 ST6GALNAC3Q8NDV1 305 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 OR1J4Q8NGS1 313 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 PNPT1Q8TCS8 783 aaKnown RBP11.77□□□□□ -0.53
COL6A6-203ENST00000511332 GPR137Q96N19 417 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 TBL1XR1Q9BZK7 514 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 HOXD1Q9GZZ0 328 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 ZNF703Q9H7S9 590 aaPredicted RBP11.77□□□□□ -0.53
COL6A6-203ENST00000511332 PROK2Q9HC23 129 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 GALNT9Q9HCQ5 603 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 POLE3Q9NRF9 147 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 SDHAF3Q9NRP4 125 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 UBQLN4Q9NRR5 601 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 QPCTLQ9NXS2 382 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 LIPT1Q9Y234 373 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 FREM3P0C091 2139 aa11.77□□□□□ -0.53
COL6A6-203ENST00000511332 PRRC2CQ9Y520 2896 aaKnown RBP11.77□□□□□ -0.53
COL6A6-203ENST00000511332 TMEM247A6NEH6 219 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 NPIPA5E9PKD4 350 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 CLIC1O00299 241 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 HMGN4O00479 90 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 SCDO00767 359 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 SCO2O43819 266 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 SHOX2O60902 331 aaPredicted RBP11.76□□□□□ -0.53
COL6A6-203ENST00000511332 STX11O75558 287 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 GUSBP08236 651 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 OR12D1P0DN82 309 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 TBXA2RP21731 343 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 GDF1P27539 372 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 PTGDSP41222 190 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 CRATP43155 626 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 CASP9P55211 416 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 FADDQ13158 208 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 NFYCQ13952 458 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 GRAMD1BQ3KR37 738 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 FLYWCH1Q4VC44 716 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 KRTCAP3Q53RY4 240 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 PAGE3Q5JUK9 113 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 RNFT1Q5M7Z0 435 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL6A6-203ENST00000511332 TIGD3Q6B0B8 471 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 HEPHL1Q6MZM0 1159 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 GALNT10Q86SR1 603 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 ZGRF1Q86YA3 2104 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 OR52N2Q8NGI0 321 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 XAGE5Q8WWM1 108 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 OIT3Q8WWZ8 545 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 RAB8BQ92930 207 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 NTNG2Q96CW9 530 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 AURKBQ96GD4 344 aaPredicted RBP11.76□□□□□ -0.53
COL6A6-203ENST00000511332 SDF2Q99470 211 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 ZNF350Q9GZX5 532 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 TSPAN10Q9H1Z9 355 aaPredicted RBP11.76□□□□□ -0.53
COL6A6-203ENST00000511332 ZDHHC11Q9H8X9 412 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 PPP4R1LQ9P1A2 415 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 ARMCX1Q9P291 453 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 P2RX2Q9UBL9 471 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 SEC14L3Q9UDX4 400 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.76□□□□□ -0.53
COL6A6-203ENST00000511332 NPIPA1Q9UND3 350 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 C15orf41Q9Y2V0 281 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 ARL2BPQ9Y2Y0 163 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 KCNE3Q9Y6H6 103 aa11.76□□□□□ -0.53
COL6A6-203ENST00000511332 TRBV5-3A0A0A0MS03 114 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 A0A1W2PQD3 144 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 EVPLLA8MZ36 301 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 ALG1L2C9J202 215 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 FADS1O60427 444 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 OXSR1O95747 527 aaPredicted RBP11.75□□□□□ -0.53
COL6A6-203ENST00000511332 FAM107AO95990 144 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 MST1P26927 711 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 DCTP40126 519 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 MAGEA5P43359 124 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 DSTNP60981 165 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 RBPJQ06330 500 aa11.75□□□□□ -0.53
COL6A6-203ENST00000511332 STX5Q13190 355 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms