RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 TMEM64Q6YI46 380 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 TUBA1AQ71U36 451 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 C16orf62Q7Z3J2 963 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 P4HA3Q7Z4N8 544 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 CACUL1Q86Y37 369 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 EFCAB13Q8IY85 973 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 LINC00469Q8N7U9 141 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 CCDC197Q8NCU1 140 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 BBOF1Q8ND07 529 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 OR9K2Q8NGE7 335 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 M1APQ8TC57 530 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 CD99L2Q8TCZ2 262 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 JPH2Q9BR39 696 aaPredicted RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 TRAF4Q9BUZ4 470 aaPredicted RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 QTRT1Q9BXR0 403 aaKnown RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 MEAF6Q9HAF1 191 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 SLC52A3Q9NQ40 469 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 SMOXQ9NWM0 555 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 KLHL28Q9NXS3 571 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 TECRQ9NZ01 308 aaKnown RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 CD300AQ9UGN4 299 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 CLEC4AQ9UMR7 237 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 PIGLQ9Y2B2 252 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 R4GN57 208 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 WDR19Q8NEZ3 1342 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 BCLAF3A2AJT9 711 aaKnown RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 TCP11X1B4DZS4 312 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 CFLARO15519 480 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 SULT1B1O43704 296 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 TRIM3O75382 744 aaPredicted RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 TOXO94900 526 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 TSPAN12O95859 305 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 NUDT3O95989 172 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 HPRP00739 348 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 EDN1P05305 212 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 FGF4P08620 206 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 FAM157CP0CG43 387 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 BCKDHAP12694 445 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 PRF1P14222 555 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 B4GALT1P15291 398 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 HNF1AP20823 631 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 MAT2AP31153 395 aaKnown RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 OTX1P32242 354 aaPredicted RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 CCR1P32246 355 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 SGSHP51688 502 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 NDST2P52849 883 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 B3GALT5-AS1P59052 145 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 DCDC1P59894 354 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 IRX1P78414 480 aaPredicted RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 MRPS6P82932 125 aaKnown RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 NFATC2Q13469 925 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 BTG3Q14201 252 aaPredicted RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 TEAD2Q15562 447 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 ODF3L2Q3SX64 289 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 FAM106AQ4KMX7 169 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 RFTN2Q52LD8 501 aaPredicted RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 PHLDA2Q53GA4 152 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 CTSL3PQ5NE16 218 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 METTL11BQ5VVY1 283 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 LYPLAL1Q5VWZ2 237 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 DMKNQ6E0U4 476 aaPredicted RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 BLOC1S2Q6QNY1 142 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 SHC4Q6S5L8 630 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 COMTD1Q86VU5 262 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 PARGQ86W56 976 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 ECHDC2Q86YB7 292 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 TGIF2LXQ8IUE1 241 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 PSTKQ8IV42 348 aaKnown RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 OR6F1Q8NGZ6 308 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 DYRK2Q92630 601 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 FCRL4Q96PJ5 515 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 TGS1Q96RS0 853 aaKnown RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 CPXM1Q96SM3 734 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 MTIF3Q9H2K0 278 aaKnown RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 RAB9BQ9NP90 201 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 A4GALTQ9NPC4 353 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 GDF3Q9NR23 364 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 UFSP2Q9NUQ7 469 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 PEF1Q9UBV8 284 aaKnown RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 CYTH4Q9UIA0 394 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 PURGQ9UJV8 347 aaKnown RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 GSTK1Q9Y2Q3 226 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 LRP12Q9Y561 859 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 KLF2Q9Y5W3 355 aaPredicted RBP1.98□□□□□ -2.09
PDE4D-218ENST00000509368 PTGDR2Q9Y5Y4 395 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 RNF215Q9Y6U7 377 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 MYO3BQ8WXR4 1341 aa1.98□□□□□ -2.09
PDE4D-218ENST00000509368 PDE4DIPQ5VU43 2346 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 IGHV4OR15-8A0A075B7B6 117 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 IGLV9-49A0A0B4J1Y8 123 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 ACOD1A6NK06 481 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 LRRC30A6NM36 301 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 SNTNA6NMZ2 147 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 SLC1A7O00341 560 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 TNFRSF13BO14836 293 aaPredicted RBP1.97□□□□□ -2.09
PDE4D-218ENST00000509368 YKT6O15498 198 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 ZNF208O43345 1280 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 SAP30O75446 220 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 PGK1P00558 417 aa1.97□□□□□ -2.09
PDE4D-218ENST00000509368 UQCRFS1P1P0C7P4 283 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms