RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 SOX30O94993 753 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 C22orf31O95567 290 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 CPEP16870 476 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 GJA4P35212 333 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 SP140Q13342 867 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF385BQ569K4 471 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 LRIF1Q5T3J3 769 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 LRRTM3Q86VH5 581 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 IQCHQ86VS3 1027 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 C1orf52Q8N6N3 182 aaKnown RBP6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF433Q8N7K0 673 aaPredicted RBP6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 PXT1Q8NFP0 134 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 OR11G2Q8NGC1 345 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 OR8S1Q8NH09 359 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 OR51Q1Q8NH59 317 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 SLC7A13Q8TCU3 470 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 GLYATL2Q8WU03 294 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 RGP1Q92546 391 aaPredicted RBP6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 PIGQQ9BRB3 760 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 NAA11Q9BSU3 229 aaPredicted RBP6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 WBP1LQ9NX94 342 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 PTCH2Q9Y6C5 1203 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 SCN9AQ15858 1988 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 SIPA1L1O43166 1804 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 IGKV6D-21A0A0A0MT36 114 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 A0A1W2PQH9 124 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 C7orf66A4D0T2 115 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 ANTXRLA6NF34 631 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 AGAP14A8MT82 685 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 CCSO14618 274 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 STK16O75716 305 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 CLDN9O95484 217 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 RAB36O95755 333 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 SERPINA3P01011 423 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 GABRA1P14867 456 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 GPX2P18283 190 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 BTF3P20290 206 aaKnown RBP6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 PTX3P26022 381 aaPredicted RBP6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 DCTDP32321 178 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 KCNJ5P48544 419 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 RGS4P49798 205 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 SEC61A1P61619 476 aaKnown RBP6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 SREBF2Q12772 1141 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 DOC2AQ14183 400 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 KLHL26Q53HC5 615 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 SPIN4Q56A73 249 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 CPTPQ5TA50 214 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 YOD1Q5VVQ6 348 aaPredicted RBP6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 MLIPQ5VWP3 458 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 H3F3CQ6NXT2 135 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 FIGNL1Q6PIW4 674 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 METTL7BQ6UX53 244 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 CEACAM19Q7Z692 300 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 SCD5Q86SK9 330 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 PAQR8Q8TEZ7 354 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 TMEM40Q8WWA1 233 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 NTAN1Q96AB6 310 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 MED8Q96G25 268 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 OR2M2Q96R28 347 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 PBX4Q9BYU1 374 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 CHST6Q9GZX3 395 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 MFFQ9GZY8 342 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 DEFB129Q9H1M3 183 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 MYEF2Q9P2K5 600 aaKnown RBP6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 NTNG1Q9Y2I2 539 aa6.82□□□□□ -1.32
LIMCH1-207ENST00000508466 NRAPQ86VF7 1730 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 OR6C65A6NJZ3 312 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 WNT10BO00744 389 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 SOCS6O14544 535 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 SCN2BO60939 215 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 YIF1AO95070 293 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 OLFM2O95897 454 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 IGHA2P01877 340 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 STATHP02808 62 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 ANXA2P07355 339 aaKnown RBP6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 SRPRAP08240 638 aaKnown RBP6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 MMP10P09238 476 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 FOSL2P15408 326 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 SLC6A4P31645 630 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 MPIP34949 423 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 GDNFP39905 211 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 PTSQ03393 145 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 KRBOX4Q5JUW0 171 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 HES5Q5TA89 166 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 MZT2AQ6P582 158 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 RFLNAQ6ZTI6 216 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 USP53Q70EK8 1073 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 C16orf59Q7L2K0 433 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 SLC29A4Q7RTT9 530 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 BHLHA9Q7RTU4 235 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 COMTD1Q86VU5 262 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 RBFAQ8N0V3 343 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 ATAD1Q8NBU5 361 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 OR1M1Q8NGA1 313 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 SCARB1Q8WTV0 552 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 SGK3Q96BR1 496 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 VRK1Q99986 396 aaPredicted RBP6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 SLC35A5Q9BS91 424 aa6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF471Q9BX82 626 aaPredicted RBP6.81□□□□□ -1.32
LIMCH1-207ENST00000508466 NOX3Q9HBY0 568 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms