RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 ZFHX3Q15911 3703 aa18.83■□□□□ 0.6
CLDND1-216ENST00000507944 NUP214P35658 2090 aaPredicted RBP18.83■□□□□ 0.6
CLDND1-216ENST00000507944 PDPK1O15530 556 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 TRIM13O60858 407 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 PRPS2P11908 318 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 DIO3P55073 304 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 GANABQ14697 944 aaKnown RBP18.82■□□□□ 0.6
CLDND1-216ENST00000507944 PCLAFQ15004 111 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 RAET1LQ5VY80 246 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 P4HA3Q7Z4N8 544 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 UBQLNLQ8IYU4 475 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 MEIOBQ8N635 442 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 OR2T11Q8NH01 316 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 CIDECQ96AQ7 238 aaPredicted RBP18.82■□□□□ 0.6
CLDND1-216ENST00000507944 FCRL1Q96LA6 429 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 CCT7Q99832 543 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 TRMOQ9BU70 441 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 EQTNQ9NQ60 294 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 ZNF337Q9Y3M9 751 aa18.82■□□□□ 0.6
CLDND1-216ENST00000507944 MAP1AP78559 2803 aaPredicted RBP18.81■□□□□ 0.6
CLDND1-216ENST00000507944 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 TLDC2A0PJX2 215 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 GXYLT2A0PJZ3 443 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 A8MXE2 369 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 AKAP10O43572 662 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 TNFSF13O75888 250 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 UTS2O95399 124 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 CHEK2O96017 543 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 LINC00032P0C843 101 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 NEFHP12036 1026 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 GPC1P35052 558 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 RNF165Q6ZSG1 346 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 CHDHQ8NE62 594 aaPredicted RBP18.81■□□□□ 0.6
CLDND1-216ENST00000507944 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.81■□□□□ 0.6
CLDND1-216ENST00000507944 PPCDCQ96CD2 204 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 ZNF764Q96H86 408 aaPredicted RBP18.81■□□□□ 0.6
CLDND1-216ENST00000507944 DACH2Q96NX9 599 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 YIPF4Q9BSR8 244 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 IQCGQ9H095 443 aaKnown RBP18.81■□□□□ 0.6
CLDND1-216ENST00000507944 TUBB1Q9H4B7 451 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 REEP4Q9H6H4 257 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 BAIAP2L1Q9UHR4 511 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 PACSIN3Q9UKS6 424 aa18.81■□□□□ 0.6
CLDND1-216ENST00000507944 HRNRQ86YZ3 2850 aaPredicted RBP18.8■□□□□ 0.6
CLDND1-216ENST00000507944 A0A1W2PNV4 684 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 SLC22A20A6NK97 555 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 LINC01387J3KSC0 135 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 TBX19O60806 448 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 GOSR1O95249 250 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 KCNH1O95259 989 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 CRHP06850 196 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 SDC1P18827 310 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 SUCLG1P53597 346 aaKnown RBP18.8■□□□□ 0.6
CLDND1-216ENST00000507944 MANFP55145 182 aaKnown RBP18.8■□□□□ 0.6
CLDND1-216ENST00000507944 CLDN15P56746 228 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 EEFSECP57772 596 aaKnown RBP18.8■□□□□ 0.6
CLDND1-216ENST00000507944 C17orf67Q0P5P2 114 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 RFTN2Q52LD8 501 aaPredicted RBP18.8■□□□□ 0.6
CLDND1-216ENST00000507944 ZNF385BQ569K4 471 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 KANK2Q63ZY3 851 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 OR2A2Q6IF42 318 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 OR5M1Q8NGP8 315 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 CEP70Q8NHQ1 597 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 ZFP28Q8NHY6 868 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 GPR151Q8TDV0 419 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 PIK3R3Q92569 461 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 C1GALT1C1Q96EU7 318 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 ZBED6CLQ96FA7 236 aaPredicted RBP18.8■□□□□ 0.6
CLDND1-216ENST00000507944 TSSK3Q96PN8 268 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 TBL1XR1Q9BZK7 514 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 L2HGDHQ9H9P8 463 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 SH3BP4Q9P0V3 963 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 DNAJC15Q9Y5T4 150 aa18.8■□□□□ 0.6
CLDND1-216ENST00000507944 OR2M5A3KFT3 312 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 H0YC42 278 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 ANGPTL1O95841 491 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 IGKV1D-16P01601 117 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 CD99P14209 185 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 MAP3K8P41279 467 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 PRKAG1P54619 331 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 TPD52P55327 224 aaPredicted RBP18.79■□□□□ 0.6
CLDND1-216ENST00000507944 RPL38P63173 70 aaKnown RBP18.79■□□□□ 0.6
CLDND1-216ENST00000507944 PRR5P85299 388 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 GRAMD1BQ3KR37 738 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 GLYR1Q49A26 553 aaPredicted RBP18.79■□□□□ 0.6
CLDND1-216ENST00000507944 VPS26BQ4G0F5 336 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 APOOLQ6UXV4 268 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 EXOC3L1Q86VI1 746 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 TGIF2LYQ8IUE0 185 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 HOMEZQ8IX15 550 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 NUP43Q8NFH3 380 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 CLHC1Q8NHS4 586 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 HOXB13Q92826 284 aaPredicted RBP18.79■□□□□ 0.6
CLDND1-216ENST00000507944 PIGQQ9BRB3 760 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 TMUB1Q9BVT8 246 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 TMED5Q9Y3A6 229 aa18.79■□□□□ 0.6
CLDND1-216ENST00000507944 SH3D21A4FU49 640 aa18.78■□□□□ 0.6
CLDND1-216ENST00000507944 H3BML4 177 aa18.78■□□□□ 0.6
CLDND1-216ENST00000507944 MSTNO14793 375 aa18.78■□□□□ 0.6
CLDND1-216ENST00000507944 LSM1O15116 133 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms