RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MISPQ8IVT2 679 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 PGAM4Q8N0Y7 254 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 OR10G3Q8NGC4 313 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 SIGLEC12Q96PQ1 595 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 TBL1XR1Q9BZK7 514 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 MTHFD2LQ9H903 347 aaPredicted RBP18.45■□□□□ 0.54
USP53-203ENST00000507597 SPAG4Q9NPE6 437 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 PCDHGA10Q9Y5H3 936 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 KMT2BQ9UMN6 2715 aaPredicted RBP18.45■□□□□ 0.54
USP53-203ENST00000507597 CELSR3Q9NYQ7 3312 aa18.45■□□□□ 0.54
USP53-203ENST00000507597 ZFHX4Q86UP3 3567 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 A0A0G2JPF8 293 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 B2RBV5 119 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 HNRNPCL2B2RXH8 293 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 HNRNPCL3B7ZW38 293 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 NME2P1O60361 137 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 ZNF354AO60765 605 aaPredicted RBP18.44■□□□□ 0.54
USP53-203ENST00000507597 UTS2O95399 124 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 CBX6O95503 412 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 HNRNPCL4P0DMR1 293 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 CYP4B1P13584 511 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 TBXA2RP21731 343 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 NME2P22392 152 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 ATP12AP54707 1039 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 PSME3P61289 254 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 ZSWIM7Q19AV6 140 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 SPATS1Q496A3 300 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 CCNJQ5T5M9 372 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 RBMXL3Q8N7X1 1067 aaKnown RBP18.44■□□□□ 0.54
USP53-203ENST00000507597 POGLUT1Q8NBL1 392 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 CATSPER1Q8NEC5 780 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 OR10A6Q8NH74 314 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 BBS10Q8TAM1 723 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 HGDQ93099 445 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 SCMH1Q96GD3 660 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 FAM173AQ9BQD7 235 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 GPATCH1Q9BRR8 931 aaKnown RBP18.44■□□□□ 0.54
USP53-203ENST00000507597 DOHHQ9BU89 302 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 SPATA5L1Q9BVQ7 753 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 ZNF350Q9GZX5 532 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 C1orf21Q9H246 121 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 ARMC7Q9H6L4 198 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 SUCOQ9UBS9 1254 aaKnown RBP18.44■□□□□ 0.54
USP53-203ENST00000507597 ZNF232Q9UNY5 417 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 ANGPT4Q9Y264 503 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 CHCHD2Q9Y6H1 151 aaPredicted RBP18.44■□□□□ 0.54
USP53-203ENST00000507597 KCNE3Q9Y6H6 103 aa18.44■□□□□ 0.54
USP53-203ENST00000507597 PRAMEF25A6NGN4 478 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 FXYD1O00168 92 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 EBAG9O00559 213 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 GMNNO75496 209 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 TNFRSF21O75509 655 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 PDE9AO76083 593 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 PDGFAP04085 211 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 BCHEP06276 602 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 TFPTP0C1Z6 253 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 ARAFP10398 606 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 CASP3P42574 277 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 KCNJ2P63252 427 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 CDK6Q00534 326 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 AP1ARQ63HQ0 302 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 REEP3Q6NUK4 255 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 PEX5LQ8IYB4 626 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 ARHGAP24Q8N264 748 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 ZNF619Q8N2I2 560 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 HIPK4Q8NE63 616 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 ZNF607Q96SK3 696 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 SLC39A3Q9BRY0 314 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 OSBPL11Q9BXB4 747 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 ANGPTL4Q9BY76 406 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 SAP130Q9H0E3 1048 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 SH2D2AQ9NP31 389 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 KLHL1Q9NR64 748 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 BOKQ9UMX3 212 aaPredicted RBP18.43■□□□□ 0.54
USP53-203ENST00000507597 IFT52Q9Y366 437 aa18.43■□□□□ 0.54
USP53-203ENST00000507597 UBOX5O94941 541 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 RASAL1O95294 804 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 H6PDO95479 791 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 EVI2BP34910 448 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 DCTP40126 519 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 MASP1P48740 699 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 EEFSECP57772 596 aaKnown RBP18.42■□□□□ 0.54
USP53-203ENST00000507597 SCARB2Q14108 478 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 LY6DQ14210 128 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 GPR68Q15743 365 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 SYPL1Q16563 259 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 RABL3Q5HYI8 236 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 GALNTL5Q7Z4T8 443 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 MDGA2Q7Z553 956 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 SLC38A5Q8WUX1 472 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 REXO5Q96IC2 774 aaKnown RBP18.42■□□□□ 0.54
USP53-203ENST00000507597 MFRPQ9BY79 579 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 BCL2L10Q9HD36 194 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 ADA2Q9NZK5 511 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 ANAPC2Q9UJX6 822 aa18.42■□□□□ 0.54
USP53-203ENST00000507597 CNOT11Q9UKZ1 510 aaKnown RBP18.42■□□□□ 0.54
USP53-203ENST00000507597 CPAMD8Q8IZJ3 1885 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 A0A1W2PQD3 144 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 K7EM74 188 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 ACOT7O00154 380 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms