RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 MARCH9Q86YJ5 346 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 OR5AU1Q8NGC0 362 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 ADAMTS16Q8TE57 1224 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 DTNBP1Q96EV8 351 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 C4orf36Q96KX1 117 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 VPS35Q96QK1 796 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 RHOJQ9H4E5 214 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 CUTCQ9NTM9 273 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 SLC35D1Q9NTN3 355 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 RDH8Q9NYR8 311 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 CHRNA9Q9UGM1 479 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 SLC2A6Q9UGQ3 507 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 ATP6V0A2Q9Y487 856 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 AP4B1Q9Y6B7 739 aa2.61□□□□□ -1.99
LSM6-205ENST00000507449 POGZQ7Z3K3 1410 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 IGHV3-35A0A0C4DH35 117 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 EFCAB7A8K855 629 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 FAM220BPB1ANY3 271 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 G3V3Y1 287 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 CDX4O14627 284 aaPredicted RBP2.6□□□□□ -1.99
LSM6-205ENST00000507449 DUX1O43812 170 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 LCMT2O60294 686 aaKnown RBP2.6□□□□□ -1.99
LSM6-205ENST00000507449 SRSF10O75494 262 aaKnown RBP2.6□□□□□ -1.99
LSM6-205ENST00000507449 PRAMEF12O95522 483 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 SLC35E2P0CK97 266 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 ANXA3P12429 323 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 UQCRBP14927 111 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 SDC1P18827 310 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 FASP25445 335 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 ACVR1BP36896 505 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 LIM2P55344 173 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 ZNF239Q16600 458 aaKnown RBP2.6□□□□□ -1.99
LSM6-205ENST00000507449 ZNF311Q5JNZ3 666 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 RIPPLY2Q5TAB7 128 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 SPINK14Q6IE38 97 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 HSD11B1LQ7Z5J1 315 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 SLC39A11Q8N1S5 342 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 TEX9Q8N6V9 391 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 FADS6Q8N9I5 356 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 STKLD1Q8NE28 680 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 KLHL30-AS1Q8NEE0 82 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 NANPQ8TBE9 248 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 VN1R17PQ8TDU5 208 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 ARNTL2Q8WYA1 636 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 PINX1Q96BK5 328 aaKnown RBP2.6□□□□□ -1.99
LSM6-205ENST00000507449 PPP1R16AQ96I34 528 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 HPDLQ96IR7 371 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 ELMO2Q96JJ3 720 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 THUMPD2Q9BTF0 503 aaKnown RBP2.6□□□□□ -1.99
LSM6-205ENST00000507449 ZNF416Q9BWM5 594 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 COMMD4Q9H0A8 199 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 IKZF5Q9H5V7 419 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 WDR76Q9H967 626 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 EXOSC3Q9NQT5 275 aaKnown RBP2.6□□□□□ -1.99
LSM6-205ENST00000507449 ELOVL2Q9NXB9 296 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 EPS15L1Q9UBC2 864 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 ZNF107Q9UII5 783 aaPredicted RBP2.6□□□□□ -1.99
LSM6-205ENST00000507449 USP16Q9Y5T5 823 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 GON4LQ3T8J9 2241 aa2.6□□□□□ -1.99
LSM6-205ENST00000507449 A0A1B0GWJ7 208 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 TRIM49BA6NDI0 452 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 NEBLO76041 1014 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 THY1P04216 161 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 CALCBP10092 127 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 DESP17661 470 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 PAX7P23759 505 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 PTBP1P26599 531 aaKnown RBP eCLIP2.59□□□□□ -1.99
LSM6-205ENST00000507449 ACADVLP49748 655 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 HSD17B7P56937 341 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 ELP6Q0PNE2 266 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 OVGP1Q12889 678 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 SLC1A5Q15758 541 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 ATAD3CQ5T2N8 411 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 UFSP1Q6NVU6 142 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 LRRC8BQ6P9F7 803 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 PAMR1Q6UXH9 720 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 LANCL3Q6ZV70 420 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 ARMCX2Q7L311 632 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 GPR65Q8IYL9 337 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 LINC01561Q8N1V8 128 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 BPIFB2Q8N4F0 458 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 M1APQ8TC57 530 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 OSTF1Q92882 214 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 SYAP1Q96A49 352 aaPredicted RBP2.59□□□□□ -1.99
LSM6-205ENST00000507449 C18orf25Q96B23 403 aaPredicted RBP2.59□□□□□ -1.99
LSM6-205ENST00000507449 TADA1Q96BN2 335 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 CCT8L2Q96SF2 557 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 GPA33Q99795 319 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 POLR3FQ9H1D9 316 aaPredicted RBP2.59□□□□□ -1.99
LSM6-205ENST00000507449 OPN3Q9H1Y3 402 aaPredicted RBP2.59□□□□□ -1.99
LSM6-205ENST00000507449 MEAF6Q9HAF1 191 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 GALPQ9UBC7 116 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 Q9UF83 564 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 SH3BGRL2Q9UJC5 107 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 BLOC1S6Q9UL45 172 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 RNF6Q9Y252 685 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 EIF3LQ9Y262 564 aaKnown RBP2.59□□□□□ -1.99
LSM6-205ENST00000507449 NAALAD2Q9Y3Q0 740 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 AP1M2Q9Y6Q5 423 aa2.59□□□□□ -1.99
LSM6-205ENST00000507449 GRIN2DO15399 1336 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms