RNA–Protein interactions for RNA: ENST00000507118.5

SMAD5-202, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-202ENST00000507118 ZNF550Q7Z398 422 aa20.54■□□□□ 0.88
SMAD5-202ENST00000507118 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.54■□□□□ 0.88
SMAD5-202ENST00000507118 C1GALT1C1Q96EU7 318 aa20.54■□□□□ 0.88
SMAD5-202ENST00000507118 TMEM237Q96Q45 408 aa20.54■□□□□ 0.88
SMAD5-202ENST00000507118 PIGQQ9BRB3 760 aa20.54■□□□□ 0.88
SMAD5-202ENST00000507118 SDHAF3Q9NRP4 125 aa20.54■□□□□ 0.88
SMAD5-202ENST00000507118 MED11Q9P086 117 aa20.54■□□□□ 0.88
SMAD5-202ENST00000507118 NFU1Q9UMS0 254 aa20.54■□□□□ 0.88
SMAD5-202ENST00000507118 ANK3Q12955 4377 aaKnown RBP20.53■□□□□ 0.88
SMAD5-202ENST00000507118 TRIM64A6NGJ6 449 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 TRIM64BA6NI03 449 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 SUPT7LO94864 414 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 DDCP20711 480 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 ZNF155Q12901 538 aaPredicted RBP20.53■□□□□ 0.88
SMAD5-202ENST00000507118 PON3Q15166 354 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 FAM214BQ7L5A3 538 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 OR2L13Q8N349 312 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 METTL6Q8TCB7 284 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 PERPQ96FX8 193 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 MDFIQ99750 246 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 TSPYL1Q9H0U9 437 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 PTGES2Q9H7Z7 377 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 AP4B1Q9Y6B7 739 aa20.53■□□□□ 0.88
SMAD5-202ENST00000507118 FBN1P35555 2871 aaKnown RBP20.52■□□□□ 0.88
SMAD5-202ENST00000507118 PRR14LQ5THK1 2151 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 DLX3O60479 287 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 IL33O95760 270 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 THBDP07204 575 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 IFI6P09912 130 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 FCGR2AP12318 317 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 TBXA2RP21731 343 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 SYT10Q6XYQ8 523 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 TIFABQ6ZNK6 161 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 GGNQ86UU5 652 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 BBS4Q96RK4 519 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 PLSCR4Q9NRQ2 329 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 SENP1Q9P0U3 644 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 GRID1Q9ULK0 1009 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 PROCRQ9UNN8 238 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 STK38LQ9Y2H1 464 aa20.52■□□□□ 0.88
SMAD5-202ENST00000507118 STAB1Q9NY15 2570 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 SONP18583 2426 aaKnown RBP20.51■□□□□ 0.87
SMAD5-202ENST00000507118 UPK1AO00322 258 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 SEC14L5O43304 696 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 KLF4O43474 513 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 TMCC2O75069 709 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 AQP8O94778 261 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 ENO1P06733 434 aaKnown RBP20.51■□□□□ 0.87
SMAD5-202ENST00000507118 SNRPAP09012 282 aaKnown RBP20.51■□□□□ 0.87
SMAD5-202ENST00000507118 PPP3CBP16298 524 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 IMPDH1P20839 514 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 HMOX2P30519 316 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 PTH2RP49190 550 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 RPS3AP61247 264 aaKnown RBP20.51■□□□□ 0.87
SMAD5-202ENST00000507118 DECR1Q16698 335 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 LCA5Q86VQ0 697 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 OR5M1Q8NGP8 315 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 DUSP19Q8WTR2 217 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 LMF2Q9BU23 707 aaKnown RBP20.51■□□□□ 0.87
SMAD5-202ENST00000507118 ZNF701Q9NV72 531 aaPredicted RBP20.51■□□□□ 0.87
SMAD5-202ENST00000507118 TMEM216Q9P0N5 145 aa20.51■□□□□ 0.87
SMAD5-202ENST00000507118 DMGDHQ9UI17 866 aaKnown RBP20.51■□□□□ 0.87
SMAD5-202ENST00000507118 H3BML4 177 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 ANXA4P09525 319 aaPredicted RBP20.5■□□□□ 0.87
SMAD5-202ENST00000507118 TAC1P20366 129 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 IL11P20809 199 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 PCSK6P29122 969 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 ECHS1P30084 290 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 KCNJ5P48544 419 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 PKNOX1P55347 436 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 ZNF763Q0D2J5 394 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 LCP2Q13094 533 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 STX5Q13190 355 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.5■□□□□ 0.87
SMAD5-202ENST00000507118 BEX5Q5H9J7 111 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 FAM71E1Q6IPT2 247 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 SH2D5Q6ZV89 423 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 OR6K3Q8NGY3 331 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 HOXB13Q92826 284 aaPredicted RBP20.5■□□□□ 0.87
SMAD5-202ENST00000507118 GFM2Q969S9 779 aaKnown RBP20.5■□□□□ 0.87
SMAD5-202ENST00000507118 L3HYPDHQ96EM0 354 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 EBPLQ9BY08 206 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 Q9N2J8 555 aa20.5■□□□□ 0.87
SMAD5-202ENST00000507118 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.49■□□□□ 0.87
SMAD5-202ENST00000507118 POC1B-GALNT4F8VUJ3 575 aa20.49■□□□□ 0.87
SMAD5-202ENST00000507118 SMAD7O15105 426 aaKnown RBP20.49■□□□□ 0.87
SMAD5-202ENST00000507118 CNOT4O95628 575 aaKnown RBP20.49■□□□□ 0.87
SMAD5-202ENST00000507118 JUNP05412 331 aaKnown RBP20.49■□□□□ 0.87
SMAD5-202ENST00000507118 ATP5F1P24539 256 aaPredicted RBP20.49■□□□□ 0.87
SMAD5-202ENST00000507118 NCBP2P52298 156 aaKnown RBP eCLIP20.49■□□□□ 0.872e-7■■■□□ 18
SMAD5-202ENST00000507118 PRKAA2P54646 552 aa20.49■□□□□ 0.87
SMAD5-202ENST00000507118 PRR5P85299 388 aa20.49■□□□□ 0.87
SMAD5-202ENST00000507118 CKAP4Q07065 602 aaKnown RBP20.49■□□□□ 0.87
SMAD5-202ENST00000507118 SH2D4BQ5SQS7 431 aa20.49■□□□□ 0.87
SMAD5-202ENST00000507118 TMEM107Q6UX40 140 aa20.49■□□□□ 0.87
SMAD5-202ENST00000507118 APOOLQ6UXV4 268 aa20.49■□□□□ 0.87
SMAD5-202ENST00000507118 PLEKHM3Q6ZWE6 761 aa20.49■□□□□ 0.87
SMAD5-202ENST00000507118 MARCH3Q86UD3 253 aa20.49■□□□□ 0.87
SMAD5-202ENST00000507118 ZC3HAV1LQ96H79 300 aaKnown RBP20.49■□□□□ 0.87
SMAD5-202ENST00000507118 ADGRG7Q96K78 797 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms