RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 FCGR2AP12318 317 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 HK1P19367 917 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 WNT3P56703 355 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 PRR5P85299 388 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 RAET1LQ5VY80 246 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 CDC20BQ86Y33 519 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 MISPQ8IVT2 679 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 GSPT2Q8IYD1 628 aaKnown RBP13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 OR4N2Q8NGD1 307 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 OR6Y1Q8NGX8 325 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 HOXB13Q92826 284 aaPredicted RBP13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 GFM2Q969S9 779 aaKnown RBP13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 INTS12Q96CB8 462 aaKnown RBP13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 MBD6Q96DN6 1003 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 APOPT1Q96IL0 206 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 PPP3R2Q96LZ3 170 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 YIPF4Q9BSR8 244 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 ROPN1BQ9BZX4 212 aaPredicted RBP13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 DSN1Q9H410 356 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 ROPN1Q9HAT0 212 aaPredicted RBP13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 NTMQ9P121 344 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 AP4B1Q9Y6B7 739 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 MPDZO75970 2070 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 TEP1Q99973 2627 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 A0A087WZY1 265 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 SLC22A20A6NK97 555 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 SMIM23A6NLE4 172 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 A8MXE2 369 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 KDM4EB2RXH2 506 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 NKX2-2O95096 273 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 NUDT17P0C025 328 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 GABRA3P34903 492 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 FRKP42685 505 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 PRIM2P49643 509 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 STARP49675 285 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 MANFP55145 182 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 MLC1Q15049 377 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 KANK2Q63ZY3 851 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 OR5M10Q6IEU7 315 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 Q6ZSR9 355 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 C10orf107Q8IVU9 208 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 EPS8L3Q8TE67 593 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 SMPDL3BQ92485 455 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 C1GALT1C1Q96EU7 318 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 MS4A4EQ96PG1 132 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 ALPK1Q96QP1 1244 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 GATA5Q9BWX5 397 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 FANCFQ9NPI8 374 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 SH3BP4Q9P0V3 963 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 RPH3AQ9Y2J0 694 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 ABCA4P78363 2273 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 C2CD3Q4AC94 2353 aa13.05□□□□□ -0.32
HMGCS1-203ENST00000507004 MED12Q93074 2177 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 ALG1L2C9J202 215 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 EMC8O43402 210 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 LYPLA1O75608 230 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 RAF1P04049 648 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 KRT16P08779 473 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 ZNF17P17021 662 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 SDC1P18827 310 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 HPCAL1P37235 193 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 SERPINB4P48594 390 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 B3GALT5-AS1P59052 145 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 IFFO1Q0D2I5 559 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 HSPB3Q12988 150 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 PDE7AQ13946 482 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 PCLAFQ15004 111 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 CLEC6AQ6EIG7 209 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 PAMR1Q6UXH9 720 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 C4orf33Q8N1A6 199 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 GPR151Q8TDV0 419 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 DUSP19Q8WTR2 217 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 SLC39A3Q9BRY0 314 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 G6PC3Q9BUM1 346 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 ATAD3AQ9NVI7 634 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 GIN1Q9NXP7 522 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 GALNT8Q9NY28 637 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 ELOVL5Q9NYP7 299 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 EIF3LQ9Y262 564 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 TRAF6Q9Y4K3 522 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 DCHS2Q6V1P9 2916 aa13.04□□□□□ -0.32
HMGCS1-203ENST00000507004 A0A1W2PNV4 684 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 TLDC2A0PJX2 215 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 SH3D21A4FU49 640 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 LSM1O15116 133 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 UTS2O95399 124 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 ANGPTL1O95841 491 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 HPGDP15428 266 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 MAP3K8P41279 467 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 AGFG1P52594 562 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 RPL38P63173 70 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 FOXF2Q12947 444 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 FAM219BQ5XKK7 198 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 ZNF551Q7Z340 670 aaPredicted RBP13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 LUZP2Q86TE4 346 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 TRABD2AQ86V40 505 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 DDIASQ8IXT1 998 aa13.03□□□□□ -0.32
HMGCS1-203ENST00000507004 BANPQ8N9N5 519 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms