RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SULF2Q8IWU5 870 aa11.78□□□□□ -0.52
TCOF1-210ENST00000506767 OR8J3Q8NGG0 315 aa11.78□□□□□ -0.52
TCOF1-210ENST00000506767 GPATCH1Q9BRR8 931 aaKnown RBP11.78□□□□□ -0.52
TCOF1-210ENST00000506767 SLC39A3Q9BRY0 314 aa11.78□□□□□ -0.52
TCOF1-210ENST00000506767 ZNF350Q9GZX5 532 aa11.78□□□□□ -0.52
TCOF1-210ENST00000506767 SAP130Q9H0E3 1048 aa11.78□□□□□ -0.52
TCOF1-210ENST00000506767 KLHL1Q9NR64 748 aa11.78□□□□□ -0.52
TCOF1-210ENST00000506767 FLRT3Q9NZU0 649 aa11.78□□□□□ -0.52
TCOF1-210ENST00000506767 TAGLN3Q9UI15 199 aa11.78□□□□□ -0.52
TCOF1-210ENST00000506767 LIPT1Q9Y234 373 aa11.78□□□□□ -0.52
TCOF1-210ENST00000506767 NPIPB9F8W1W9 429 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 KLRC4-KLRK1H3BQV0 150 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 AIM2O14862 343 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 PEX1O43933 1283 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 FCMRO60667 390 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 ICOSLGO75144 302 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 STX11O75558 287 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 C1QL1O75973 258 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 UTS2O95399 124 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 P04436 131 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 NUDT7P0C024 238 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 TBXA2RP21731 343 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 SLC6A2P23975 617 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 RFX3P48380 749 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 GZMMP51124 257 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 GAS1P54826 345 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 MTPNP58546 118 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 INAQ16352 499 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 SYPL1Q16563 259 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 GRAMD1BQ3KR37 738 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 TBCELQ5QJ74 424 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 ATAD3BQ5T9A4 648 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 BICRALQ6AI39 1079 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 SLC30A6Q6NXT4 461 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 C16orf62Q7Z3J2 963 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 GALNT10Q86SR1 603 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 OR4C3Q8NH37 302 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 GRHL3Q8TE85 626 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 FRMD6Q96NE9 622 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 TRNT1Q96Q11 434 aaKnown RBP11.77□□□□□ -0.53
TCOF1-210ENST00000506767 HOPXQ9BPY8 73 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-210ENST00000506767 THUMPD3Q9BV44 507 aaKnown RBP11.77□□□□□ -0.53
TCOF1-210ENST00000506767 TRIM8Q9BZR9 551 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 KAT8Q9H7Z6 458 aaKnown RBP11.77□□□□□ -0.53
TCOF1-210ENST00000506767 POLE3Q9NRF9 147 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 ANAPC2Q9UJX6 822 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 ABCG2Q9UNQ0 655 aa11.77□□□□□ -0.53
TCOF1-210ENST00000506767 A0A0G2JMM0 328 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 A0A1W2PPB8 328 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 A0A1W2PRS3 328 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 PINLYPA6NC86 204 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 PRAMEF25A6NGN4 478 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 KIR3DP1A8MWS1 328 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 HS6ST1O60243 411 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 TRIM3O75382 744 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-210ENST00000506767 SNX4O95219 450 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 OXSR1O95747 527 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-210ENST00000506767 CHRM4P08173 479 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 T-ENOLP0DO92 83 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 ATP6V1C1P21283 382 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 EVI2BP34910 448 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 NUDT2P50583 147 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 GPR85P60893 370 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 FOXO1Q12778 655 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 NFATC3Q12968 1075 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 ADRM1Q16186 407 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 RABL3Q5HYI8 236 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 PRAMEF20Q5VT98 475 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 TYW3Q6IPR3 259 aaKnown RBP11.76□□□□□ -0.53
TCOF1-210ENST00000506767 APOOLQ6UXV4 268 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 FRRS1Q6ZNA5 592 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 LRRC74BQ6ZQY2 392 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 OLIG3Q7RTU3 272 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 TRPM8Q7Z2W7 1104 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 NET1Q7Z628 596 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-210ENST00000506767 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-210ENST00000506767 SERPINA11Q86U17 422 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 CALHM3Q86XJ0 350 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 ANKFN1Q8N957 763 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 ZFP62Q8NB50 900 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-210ENST00000506767 POGLUT1Q8NBL1 392 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 OR2M7Q8NG81 312 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 SLC38A5Q8WUX1 472 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 PMM1Q92871 262 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 TMEM41AQ96HV5 264 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 TAAR6Q96RI8 345 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 SH3GL1Q99961 368 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 FAM173AQ9BQD7 235 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 RTN4RQ9BZR6 473 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 HOXD1Q9GZZ0 328 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 SLC38A1Q9H2H9 487 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 TMEM38AQ9H6F2 299 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 RUBCNLQ9H714 662 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 A4GALTQ9NPC4 353 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 UBQLN4Q9NRR5 601 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 LUZP4Q9P127 313 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 P2RX2Q9UBL9 471 aa11.76□□□□□ -0.53
TCOF1-210ENST00000506767 SMG1Q96Q15 3661 aaKnown RBP11.76□□□□□ -0.53
TCOF1-210ENST00000506767 A0A1W2PQD3 144 aa11.75□□□□□ -0.53
TCOF1-210ENST00000506767 ALG1L2C9J202 215 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms